RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 AGAP5A6NIR3 686 aa19.4■□□□□ 0.7
CACNA1B-201ENST00000277549 G3V3Y1 287 aa19.4■□□□□ 0.7
CACNA1B-201ENST00000277549 CELP19835 753 aa19.4■□□□□ 0.7
CACNA1B-201ENST00000277549 PRKAR1BP31321 381 aa19.4■□□□□ 0.7
CACNA1B-201ENST00000277549 RGS6P49758 472 aa19.39■□□□□ 0.7
CACNA1B-201ENST00000277549 KCTD18Q6PI47 426 aaPredicted RBP19.39■□□□□ 0.7
CACNA1B-201ENST00000277549 ZNF517Q6ZMY9 492 aaPredicted RBP19.39■□□□□ 0.7
CACNA1B-201ENST00000277549 RHBDD3Q9Y3P4 386 aa19.39■□□□□ 0.7
CACNA1B-201ENST00000277549 PPP1R3DO95685 299 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 IFNA7P01567 189 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 CX3CR1P49238 355 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 KRBOX4Q5JUW0 171 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 FOXJ1Q92949 421 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 ZNF845Q96IR2 970 aaPredicted RBP19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 ULBP3Q9BZM4 244 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 LRRN3E7EW58 273 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 ZNF780AO75290 641 aaPredicted RBP19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 LIPHQ8WWY8 451 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 H1FXQ92522 213 aaKnown RBP19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 OR5B12Q96R08 314 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 SLC17A9Q9BYT1 436 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 LRRN3Q9H3W5 708 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 C8orf33Q9H7E9 229 aaPredicted RBP19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 ZNF160Q9HCG1 818 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 SLCO3A1Q9UIG8 710 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 HLA-DPB1P04440 258 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 CLEC3BP05452 202 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 FBXO45P0C2W1 286 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 PORP16435 677 aaPredicted RBP19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 SGTBQ96EQ0 304 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 SYNPO2LQ9H987 977 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 LPLP06858 475 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 CAMK2DQ13557 499 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 GRIN2CQ14957 1233 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 HES5Q5TA89 166 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 TNFRSF1BP20333 461 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 P2RY2P41231 377 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 TSPAN33Q86UF1 283 aa19.39■□□□□ 0.69
CACNA1B-201ENST00000277549 EMC8O43402 210 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 PRICKLE3O43900 615 aaPredicted RBP19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 ZNF217O75362 1048 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 C1GALT1C1LP0DN25 315 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 XCR1P46094 333 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 SYT4Q9H2B2 425 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 C17orf105B2RV13 164 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 SERPINA7P05543 415 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 RABIFP47224 123 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 TMEM25Q86YD3 366 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 TOE1Q96GM8 510 aaKnown RBP19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 EBLN1P0CF75 366 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 SIRPAP78324 504 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 MAPKAP1Q9BPZ7 522 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 DERL2Q9GZP9 239 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 TMED5Q9Y3A6 229 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 NFKBIEO00221 500 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 PROS1P07225 676 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 ZNF14P17017 642 aaPredicted RBP19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 CD70P32970 193 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 PLCXD3Q63HM9 321 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 SAMD11Q96NU1 681 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 URM1Q9BTM9 101 aaKnown RBP19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 PRSS56P0CW18 603 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 COL28A1Q2UY09 1125 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 SLC36A3Q495N2 470 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 NKAIN2Q5VXU1 208 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 OR2T33Q8NG76 320 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 HDAC2Q92769 488 aaKnown RBP19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 C14orf119Q9NWQ9 140 aa19.38■□□□□ 0.69
CACNA1B-201ENST00000277549 ANKRD30BLA7E2S9 258 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 CERS1P27544 350 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 PIK3CBP42338 1070 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 HK3P52790 923 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 FAM189A2Q15884 450 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 DUS1LQ6P1R4 473 aaKnown RBP19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 CDH10Q9Y6N8 788 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 LDB3O75112 727 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 UPP1Q16831 310 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 PIAS4Q8N2W9 510 aaPredicted RBP19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 PKP2Q99959 881 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 SLC29A3Q9BZD2 475 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 KLHL42Q9P2K6 505 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 SYT7O43581 403 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 CEBPBP17676 345 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 GPR143P51810 404 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 CTXN1P60606 82 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 NDNFQ8TB73 568 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 PCDHGA2Q9Y5H1 932 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 FAM72CH0Y354 149 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 FAM72AQ5TYM5 149 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 C22orf42Q6IC83 251 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 FAM72DQ6L9T8 149 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 GPR155Q7Z3F1 870 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 FAM72BQ86X60 149 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 STK35Q8TDR2 534 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 CIDECQ96AQ7 238 aaPredicted RBP19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 SLC6A16Q9GZN6 736 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 LINC00597Q9H2U6 94 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 GJE1A6NN92 205 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 GOSR2O14653 212 aa19.37■□□□□ 0.69
CACNA1B-201ENST00000277549 GSK3BP49841 420 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms