RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RPLP0P6Q8NHW5 317 aa10.96□□□□□ -0.65
CLSTN3-201ENST00000266546 C1orf216Q8TAB5 229 aa10.96□□□□□ -0.65
CLSTN3-201ENST00000266546 COQ8BQ96D53 544 aa10.96□□□□□ -0.65
CLSTN3-201ENST00000266546 MED30Q96HR3 178 aa10.96□□□□□ -0.65
CLSTN3-201ENST00000266546 LYSMD1Q96S90 227 aa10.96□□□□□ -0.65
CLSTN3-201ENST00000266546 NTMT1Q9BV86 223 aa10.96□□□□□ -0.65
CLSTN3-201ENST00000266546 CALML5Q9NZT1 146 aa10.96□□□□□ -0.65
CLSTN3-201ENST00000266546 LRRC72A6NJI9 287 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 WASH3PC4AMC7 463 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 SCAMP2O15127 329 aaKnown RBP10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 S100A6P06703 90 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 CCR2P41597 374 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 BDKRB1P46663 353 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 CDKL4Q5MAI5 379 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 EOGTQ5NDL2 527 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 KDM4DQ6B0I6 523 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 LAX1Q8IWV1 398 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 OR4C6Q8NH72 309 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 WDR48Q8TAF3 677 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 SORCS1Q8WY21 1168 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 GLYATL1Q969I3 302 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 KXD1Q9BQD3 176 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 NEUROD4Q9HD90 331 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 OR51B4Q9Y5P0 310 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 STON1Q9Y6Q2 735 aa10.96□□□□□ -0.66
CLSTN3-201ENST00000266546 FXYD6-FXYD2A0A087WZ82 144 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 A0A0G2JN53 185 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 FAM25EA8MYX2 175 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 PCDH17O14917 1159 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 HSD3B1P14060 373 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 HSD3B2P26439 372 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 MLLT10P55197 1068 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 TCEAL5Q5H9L2 206 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 FRMPD2BQ6IN97 320 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 METTL2BQ6P1Q9 378 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 RNF44Q7L0R7 432 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 IFT27Q9BW83 186 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 FXYD6Q9H0Q3 95 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 NTN4Q9HB63 628 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 IMP3Q9NV31 184 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 ZNF69Q9UC07 566 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 OR1F1O43749 312 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 RFPL3O75679 317 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 SERPINA3P01011 423 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 SUSD1Q6UWL2 747 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 NATD1Q8N6N6 113 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 TESCQ96BS2 214 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 CCDC120Q96HB5 630 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 NDC1Q9BTX1 674 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 CACNG6Q9BXT2 260 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 POLMQ9NP87 494 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 UTS2RQ9UKP6 389 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 SHROOM3Q8TF72 1996 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 ZDBF2Q9HCK1 2354 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 NPIPB15A6NHN6 443 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 JUNDP17535 347 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 TACR1P25103 407 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 PCGF2P35227 344 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 DDOSTP39656 456 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 KCNC3Q14003 757 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 SOWAHCQ53LP3 525 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 COMMD7Q86VX2 200 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 OR52N2Q8NGI0 321 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 OR2A12Q8NGT7 310 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 OR14C36Q8NHC7 312 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 HMGCLL1Q8TB92 370 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 PDLIM5Q96HC4 596 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 SECISBP2Q96T21 854 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 CSF3RQ99062 836 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 TAS2R16Q9NYV7 291 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 OR14I1A6ND48 311 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 CD8B2A6NJW9 211 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 PRKYO43930 277 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 ALPPP05187 535 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 CD8BP10966 210 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 HLA-EP13747 358 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 WNT4P56705 351 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 DNAJC5GQ8N7S2 189 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 OR51G2Q8NGK0 314 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 SLC7A6Q92536 515 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 OR4K3Q96R72 315 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 PBX4Q9BYU1 374 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 GPSM3Q9Y4H4 160 aa10.95□□□□□ -0.66
CLSTN3-201ENST00000266546 SRCAPQ6ZRS2 3230 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 OR7A17O14581 309 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 FZD6O60353 706 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 C5AR1P21730 350 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 HSD17B2P37059 387 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 MTNR1AP48039 350 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 PREPP48147 710 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 NCBP2P52298 156 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 ST3GAL3Q11203 375 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 HSD17B12Q53GQ0 312 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 PAMR1Q6UXH9 720 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 FRRS1Q6ZNA5 592 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 OAFQ86UD1 273 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 LSM14AQ8ND56 463 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 PJA1Q8NG27 643 aa10.94□□□□□ -0.66
CLSTN3-201ENST00000266546 OR5M11Q96RB7 305 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms