RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 OR10Q1Q8NGQ4 319 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 NEIL3Q8TAT5 605 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 SPPL2AQ8TCT8 520 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 SELENOMQ8WWX9 145 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 ADIPOR1Q96A54 375 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 TM4SF18Q96CE8 201 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 DOHHQ9BU89 302 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 OR10A5Q9H207 317 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 LDAHQ9H6V9 325 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 BRF2Q9HAW0 419 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 MCCC2Q9HCC0 563 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 QPCTLQ9NXS2 382 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 SPRR3Q9UBC9 169 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 FOXD3Q9UJU5 478 aaPredicted RBP8.93□□□□□ -0.98
VPS41-201ENST00000265745 SNX6Q9UNH7 406 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 SLC12A4Q9UP95 1085 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 PCDHA9Q9Y5H5 950 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 NPFFR2Q9Y5X5 522 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 NCOA6Q14686 2063 aaPredicted RBP8.92□□□□□ -0.98
VPS41-201ENST00000265745 EXOC1LA0A1B0GW35 172 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 C1orf226A1L170 272 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 FAM90A27PA6NNH2 459 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 CAPN14A8MX76 684 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 TP53I11O14683 189 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 DLX3O60479 287 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 GUCY1B2O75343 617 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 SNX4O95219 450 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 LRATO95237 230 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 ATP1B1P05026 303 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 ABHD2P08910 425 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 CSNK2A2P19784 350 aaPredicted RBP8.92□□□□□ -0.98
VPS41-201ENST00000265745 POU3F2P20265 443 aaPredicted RBP8.92□□□□□ -0.98
VPS41-201ENST00000265745 NT5EP21589 574 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 MSX1P28360 303 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 GCAP28676 217 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 ADH7P40394 386 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 TLE4Q04727 773 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 CLCQ05315 142 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 MAP4K2Q12851 820 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 RPS6KA2Q15349 733 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 UNC50Q53HI1 259 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 FNDC7Q5VTL7 733 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 FAM219BQ5XKK7 198 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 HLA-DQA1Q5Y7H0 255 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 TMEM198Q66K66 360 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 BICRALQ6AI39 1079 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 LCA5Q86VQ0 697 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 LIX1LQ8IVB5 337 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 DMRTC2Q8IXT2 367 aaPredicted RBP8.92□□□□□ -0.98
VPS41-201ENST00000265745 MMP21Q8N119 569 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 CHTF18Q8WVB6 975 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 DIO2Q92813 273 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 HPS1Q92902 700 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 NTNG2Q96CW9 530 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 MTBPQ96DY7 904 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 JSRP1Q96MG2 331 aaPredicted RBP8.92□□□□□ -0.98
VPS41-201ENST00000265745 SECISBP2Q96T21 854 aaKnown RBP8.92□□□□□ -0.98
VPS41-201ENST00000265745 ANGPTL4Q9BY76 406 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 EXO5Q9H790 373 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 NMRK1Q9NWW6 199 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 ALKBH4Q9NXW9 302 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 TMEM216Q9P0N5 145 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 VPS29Q9UBQ0 182 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 B4GALT7Q9UBV7 327 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 TRPS1Q9UHF7 1281 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 ZNF639Q9UID6 485 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 PSME2Q9UL46 239 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 NFU1Q9UMS0 254 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 PCDHGB3Q9Y5G1 929 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 GPC6Q9Y625 555 aaPredicted RBP8.92□□□□□ -0.98
VPS41-201ENST00000265745 CSMD2Q7Z408 3487 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 PDZD2O15018 2839 aa8.92□□□□□ -0.98
VPS41-201ENST00000265745 A0A0G2JNJ9 132 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 GOLGA6L10A6NI86 522 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 FOXO6A8MYZ6 492 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 MANBAO00462 879 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 TNFRSF21O75509 655 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 OR4F21O95013 312 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 ABCB1P08183 1280 aaPredicted RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 GABRA1P14867 456 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 NAGAP17050 411 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 TAC1P20366 129 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 GPX3P22352 226 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 ABCD3P28288 659 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 DEKP35659 375 aaKnown RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 SOX18P35713 384 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 FEN1P39748 380 aaKnown RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 CASP3P42574 277 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 ZFP36L2P47974 494 aaKnown RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 TRPC1P48995 793 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 NRG3P56975 720 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 TRA2BP62995 288 aaKnown RBP8.91□□□□□ -0.98
VPS41-201ENST00000265745 GTF3C1Q12789 2109 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 POU4F2Q12837 409 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 DUSP8Q13202 625 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 RASA2Q15283 850 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 PRICKLE4Q2TBC4 344 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 ZNF678Q5SXM1 525 aa8.91□□□□□ -0.98
VPS41-201ENST00000265745 TEX35Q5T0J7 233 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms