RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 SYT6Q5T7P8 510 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ATAD3BQ5T9A4 648 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 SLC16A12Q6ZSM3 486 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 TAF8Q7Z7C8 310 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 RBM45Q8IUH3 476 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 LACC1Q8IV20 430 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 DNAJC22Q8N4W6 341 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF655Q8N720 491 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 OR4K14Q8NGD5 310 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 OR4D11Q8NGI4 311 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 PATE1Q8WXA2 126 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 C16orf58Q96GQ5 468 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 C10orf90Q96M02 699 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 CSF3RQ99062 836 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 FNDC11Q9BVV2 318 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 PINK1Q9BXM7 581 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ACTRT3Q9BYD9 372 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 UCK2Q9BZX2 261 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 KLHL25Q9H0H3 589 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 EQTNQ9NQ60 294 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 MS4A12Q9NXJ0 267 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF226Q9NYT6 803 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 KCMF1Q9P0J7 381 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 FTSJ1Q9UET6 329 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 LIPT1Q9Y234 373 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 KLK4Q9Y5K2 254 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 XIRP2A4UGR9 3374 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 SPTY2D1-AS1A0A0U1RR47 76 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 ZAR1LA6NP61 321 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 CLCA1A8K7I4 914 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 OR10H3O60404 316 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 MAN1A2O60476 641 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 SEMA7AO75326 666 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 LGI1O95970 557 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 THEGLP0DJG4 465 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 CTSEP14091 401 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 GABRB1P18505 474 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 CHMP24386 653 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 ACVR2AP27037 513 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 NUDT1P36639 197 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 STT3AP46977 705 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 XKP51811 444 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 UGT2B15P54855 530 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 UBE2IP63279 158 aaKnown RBP12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 HPCAP84074 193 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 EIF2B5Q13144 721 aaKnown RBP12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 FRMPD2BQ6IN97 320 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 Q6ZS52 159 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 CCDC103Q8IW40 242 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 KLHL6Q8WZ60 621 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 KAT2AQ92830 837 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 SIGLEC11Q96RL6 698 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 GPR174Q9BXC1 333 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 TCEAL2Q9H3H9 227 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 PRDM9Q9NQV7 894 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 HRASLS2Q9NWW9 162 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 DAPP1Q9UN19 280 aa12.16□□□□□ -0.46
SPTLC1-201ENST00000262554 LOC105369274A0A096LPK9 316 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 LOC102723532A0A0G2JNH3 316 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 A0A0J9YY10 115 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 A0A1W2PRQ8 180 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 DUXAA6NLW8 204 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 FAM227AF5H4B4 570 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 H0YGG7 62 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 ZSCAN9O15535 394 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 BCAS1O75363 584 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 ALPPP05187 535 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 OSMP13725 252 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 POU1F1P28069 291 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 MAN2A2P49641 1150 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 ARF3P61204 181 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 BNIP3Q12983 259 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 RUNX2Q13950 521 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 DGCR6Q14129 220 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 FZD2Q14332 565 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 SEC23BQ15437 767 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 LTB4RQ15722 352 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 CTF1Q16619 201 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF542PQ5EBM4 170 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 OLIG3Q7RTU3 272 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 C16orf62Q7Z3J2 963 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 OR4N4Q8N0Y3 316 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 BAHD1Q8TBE0 780 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 TBC1D15Q8TC07 691 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 SLC37A2Q8TED4 501 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 RSC1A1Q92681 617 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 COL26A1Q96A83 441 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 YIPF6Q96EC8 236 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 MS4A4EQ96PG1 132 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 TRNT1Q96Q11 434 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 WFDC6Q9BQY6 131 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 TRIM45Q9H8W5 580 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 PLGRKTQ9HBL7 147 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 LYRM4Q9HD34 91 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 FKBP14Q9NWM8 211 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 SLC13A4Q9UKG4 626 aa12.15□□□□□ -0.46
SPTLC1-201ENST00000262554 A4GNTQ9UNA3 340 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms