RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 MGAT4BQ9UQ53 548 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 V9GYH0 126 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 PLXND1Q9Y4D7 1925 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 CASKO14936 926 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 NR2F6P10588 404 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 APEX1P27695 318 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 PXNP49023 591 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 INPP1P49441 399 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 ST8SIA6P61647 398 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF770Q6IQ21 691 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 PARM1Q6UWI2 310 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 B3GLCTQ6Y288 498 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 ADGRF3Q8IZF5 1079 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 FGF14Q92915 247 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 NACC2Q96BF6 587 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 OR2B2Q9GZK3 357 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 OSGEPL1Q9H4B0 414 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 ANKRD34BA5PLL1 514 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 OR6C70A6NIJ9 312 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF670-ZNF695F2Z2N8 137 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 FOXE1O00358 373 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 LATO43561 262 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 PI15O43692 258 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 NCR1O76036 304 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 PSKH1P11801 424 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 LIMS1P48059 325 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 RPS25P62851 125 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 PSPHP78330 225 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 RHAGQ02094 409 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 GPAT3Q53EU6 434 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 TECPR1Q7Z6L1 1165 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 MTERF3Q96E29 417 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 ST6GAL2Q96JF0 529 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 TEFMQ96QE5 360 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 TMED9Q9BVK6 235 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 TAPBPLQ9BX59 468 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 TM7SF3Q9NS93 570 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 FRYLO94915 3013 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 A0A075B6Q4 140 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 CAPN5O15484 640 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 HOXC11O43248 304 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 MMP11P24347 488 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 GIPRP48546 466 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 GPR50Q13585 617 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 INSL4Q14641 139 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 LASP1Q14847 261 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF750Q32MQ0 723 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 FAM83HQ6ZRV2 1179 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 NANOGP1Q8N7R0 232 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 LILRB4Q8NHJ6 448 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 SMPDL3AQ92484 453 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 TFGQ92734 400 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 MRPL38Q96DV4 380 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 LMLNQ96KR4 655 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 MYADMQ96S97 322 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 TRMT61BQ9BVS5 477 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 OR51I1Q9H343 314 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC25A19Q9HC21 320 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 CNIH4Q9P003 139 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 HCN2Q9UL51 889 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 SNX7Q9UNH6 387 aa13.68□□□□□ -0.22
SFSWAP-201ENST00000261674 PLXNB3Q9ULL4 1909 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 HMGN4O00479 90 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 B4GALT2O60909 372 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 CPNE3O75131 537 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 MYL9P24844 172 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 PDE7AQ13946 482 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 SLX4IPQ5VYV7 408 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 VN1R5Q7Z5H4 357 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 ZER1Q7Z7L7 766 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 PDZD3Q86UT5 571 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 COMTD1Q86VU5 262 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 C19orf18Q8NEA5 215 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 OR52I1Q8NGK6 324 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 KLK6Q92876 244 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 GPA33Q99795 319 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 C17orf62Q9BQA9 187 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 SRRQ9GZT4 340 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC22A4Q9H015 551 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 C3orf14Q9HBI5 128 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 MOSPD1Q9UJG1 213 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 PCYT1BQ9Y5K3 369 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 HELZP42694 1942 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 PRR23AA6NEV1 266 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 MAN2A2P49641 1150 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 KIAA1161Q6NSJ0 714 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 PLET1Q6UQ28 207 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 NLGN4YQ8NFZ3 816 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 OR6T1Q8NGN1 323 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 OR52P1PQ8NH57 321 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 TM4SF18Q96CE8 201 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 KCTD7Q96MP8 289 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 CITED4Q96RK1 184 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 BBS4Q96RK4 519 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 SCN3AQ9NY46 2000 aa13.67□□□□□ -0.22
SFSWAP-201ENST00000261674 A0A1B0GVC2 190 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 A6NIN4 97 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 FAAHO00519 579 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms