RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CLCN2P51788 898 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 CHN2P52757 468 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 NR6A1Q15406 480 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 LSM12Q3MHD2 195 aaKnown RBP15.61■□□□□ 0.09
SDCBP-201ENST00000260130 ABHD17BQ5VST6 288 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 NOXRED1Q6NXP6 359 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 MMP21Q8N119 569 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 SLC5A8Q8N695 610 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 NCLNQ969V3 563 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 VMP1Q96GC9 406 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 ZNF354BQ96LW1 612 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 CCT7Q99832 543 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 NDUFA13Q9P0J0 144 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 POLR3HQ9Y535 204 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-201ENST00000260130 DYRK3O43781 588 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 OR10H2O60403 315 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 PABPC4LP0CB38 370 aaKnown RBP15.6■□□□□ 0.09
SDCBP-201ENST00000260130 ALDH9A1P49189 494 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 XKP51811 444 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 ZNF763Q0D2J5 394 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 HEPACAMQ14CZ8 416 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 NADK2Q4G0N4 442 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 ACER2Q5QJU3 275 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 FCRLBQ6BAA4 426 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 MFRPQ9BY79 579 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 DEFB126Q9BYW3 111 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 WDR55Q9H6Y2 383 aaPredicted RBP15.6■□□□□ 0.09
SDCBP-201ENST00000260130 HEMK1Q9Y5R4 338 aaPredicted RBP15.6■□□□□ 0.09
SDCBP-201ENST00000260130 DOCK10Q96BY6 2186 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 TNRC6AQ8NDV7 1962 aaKnown RBP15.6■□□□□ 0.09
SDCBP-201ENST00000260130 LSM1O15116 133 aaKnown RBP15.6■□□□□ 0.09
SDCBP-201ENST00000260130 MEP1AQ16819 746 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 DGAT2L6Q6ZPD8 337 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 PGAM4Q8N0Y7 254 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 OR1N1Q8NGS0 311 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 SLC2A12Q8TD20 617 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 LRGUKQ96M69 825 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 OR8D2Q9GZM6 311 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 PFDN4Q9NQP4 134 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 WBP11Q9Y2W2 641 aaKnown RBP15.6■□□□□ 0.09
SDCBP-201ENST00000260130 COMMD3-BMI1R4GMX3 469 aa15.6■□□□□ 0.09
SDCBP-201ENST00000260130 TRBV11-1A0A0K0K1C0 115 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 SMIM31A0A1B0GVY4 71 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 A0A1W2PS29 197 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 SUV39H1O43463 412 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 DENRO43583 198 aaKnown RBP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 ERAL1O75616 437 aaKnown RBP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 DDAH2O95865 285 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 EPHA3P29320 983 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 GALNSP34059 522 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 FLOT2Q14254 428 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 RFTN2Q52LD8 501 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 XKR7Q5GH72 579 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 RPS19BP1Q86WX3 136 aaKnown RBP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 HAS2Q92819 552 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 RIT1Q92963 219 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 SENP5Q96HI0 755 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 CDRT15Q96T59 188 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 NPAS2Q99743 824 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 CDCP1Q9H5V8 836 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 PLA2G3Q9NZ20 509 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 ZNF223Q9UK11 482 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 TMED5Q9Y3A6 229 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 COL6A6A6NMZ7 2263 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 DYTNA2CJ06 578 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 CPMP14384 443 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 PORP16435 677 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-201ENST00000260130 ARG2P78540 354 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 PIGGQ5H8A4 983 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 COLEC12Q5KU26 742 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 UGT2A3Q6UWM9 527 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 LGI4Q8N135 537 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 MARVELD2Q8N4S9 558 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 FCRL1Q96LA6 429 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 PPP3R2Q96LZ3 170 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 C3orf30Q96M34 536 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 NUF2Q9BZD4 464 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 RNF32Q9H0A6 362 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 ZNF385DQ9H6B1 395 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 EFCAB1Q9HAE3 211 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 UTS2RQ9UKP6 389 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 RAB26Q9ULW5 256 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 B3GNT3Q9Y2A9 372 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 CSAG2Q9Y5P2 127 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 ZNF780BQ9Y6R6 833 aa15.59■□□□□ 0.09
SDCBP-201ENST00000260130 ATP6AP2A0A1C7CYW4 349 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ATP6AP2O75787 350 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ZFAND5O76080 213 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 WDPCPO95876 746 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 RPL38P63173 70 aaKnown RBP15.58■□□□□ 0.08
SDCBP-201ENST00000260130 C2orf80Q0P641 193 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ART3Q13508 389 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF750Q32MQ0 723 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 SLC6A19Q695T7 634 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 Q6ZS92 163 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF321PQ8N8H1 164 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 CDC26Q8NHZ8 85 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF721Q8TF20 911 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 PNPLA2Q96AD5 504 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms