RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TSPEARQ8WU66 669 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 AHCYL2Q96HN2 611 aaKnown RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 OR5M11Q96RB7 305 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 LMF1Q96S06 567 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF559Q9BR84 538 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 SERHL2Q9H4I8 314 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 SPATA7Q9P0W8 599 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 CPNE7Q9UBL6 633 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 BTNL2Q9UIR0 455 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 BLOC1S6Q9UL45 172 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 GPR34Q9UPC5 381 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 COLEC10Q9Y6Z7 277 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 DMXL1Q9Y485 3027 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 TANC1Q9C0D5 1861 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 TRBV5-3A0A0A0MS03 114 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 IGHV3-20A0A0C4DH32 117 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 HMGN4O00479 90 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 RGS10O43665 173 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 HTR1AP08908 422 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 CDK4P11802 303 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 UGT2B7P16662 529 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 SSTR4P31391 388 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 CENPAP49450 140 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 TGM3Q08188 693 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF155Q12901 538 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 AGERQ15109 404 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 PTGES3Q15185 160 aaKnown RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 COQ5Q5HYK3 327 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 LRIF1Q5T3J3 769 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 CASP12Q6UXS9 341 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 PLEKHG7Q6ZR37 379 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 PLEKHM3Q6ZWE6 761 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 CBLL1Q75N03 491 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 TSPYL5Q86VY4 417 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF655Q8N720 491 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 OR52N2Q8NGI0 321 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 SLC7A13Q8TCU3 470 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF300Q96RE9 604 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 FAIM2Q9BWQ8 316 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 OR8D2Q9GZM6 311 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF229Q9UJW7 825 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 RNF6Q9Y252 685 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 PCDHGB3Q9Y5G1 929 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 CORINQ9Y5Q5 1042 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 OBSL1O75147 1896 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 C5orf67F2Z3F1 127 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GDF9O60383 454 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 SLC2A10O95528 541 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 CHRM4P08173 479 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 CCNYL3P0C7X3 344 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 CSNK2A2P19784 350 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ATP5A1P25705 553 aaKnown RBP8.56□□□□□ -1.04
CKAP2-201ENST00000258607 NOS3P29474 1203 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GABRA3P34903 492 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 PDX1P52945 283 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ISL1P61371 349 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ADARB1P78563 741 aaKnown RBP8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GBX1Q14549 363 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 INSL4Q14641 139 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 NR1D2Q14995 579 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 TAB1Q15750 504 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 DPY19L1Q2PZI1 675 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 COLEC12Q5KU26 742 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 OR2G6Q5TZ20 316 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 TTLL10Q6ZVT0 673 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 FAM9CQ8IZT9 166 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 MS4A6EQ96DS6 147 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ABHD8Q96I13 439 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 AMDHD1Q96NU7 426 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GAL3ST1Q99999 423 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 CACYBPQ9HB71 228 aaKnown RBP8.56□□□□□ -1.04
CKAP2-201ENST00000258607 C1GALT1Q9NS00 363 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 UCKL1Q9NWZ5 548 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ACTR10Q9NZ32 417 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 PRAMEF27A3QJZ7 478 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 KLHL18O94889 574 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 NR2F6P10588 404 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GTF2E2P29084 291 aaKnown RBP8.56□□□□□ -1.04
CKAP2-201ENST00000258607 AKT2P31751 481 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 SERPINB10P48595 397 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 RGS1Q08116 209 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 AQP6Q13520 282 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GGTA1PQ4G0N0 100 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 TMEM52BQ4KMG9 183 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ENTHD1Q8IYW4 607 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 OR7G2Q8NG99 324 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GPR32P1Q8NGA4 272 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 CCDC115Q96NT0 180 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 DEPDC7Q96QD5 511 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 RSPO3Q9BXY4 272 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-201ENST00000258607 HDAC8Q9BY41 377 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 TBC1D17Q9HA65 648 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 TM9SF3Q9HD45 589 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ATP13A2Q9NQ11 1180 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 ACSL5Q9ULC5 683 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 RBMX2Q9Y388 322 aaKnown RBP8.56□□□□□ -1.04
CKAP2-201ENST00000258607 GBF1Q92538 1859 aa8.56□□□□□ -1.04
CKAP2-201ENST00000258607 DOK2O60496 412 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms