RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 FAM129CQ86XR2 697 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 KRT78Q8N1N4 520 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 TBC1D19Q8N5T2 526 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 YIPF7Q8N8F6 280 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 SETD7Q8WTS6 366 aaKnown RBP16.03■□□□□ 0.16
CDK4-201ENST00000257904 CYB5D2Q8WUJ1 264 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 UFD1Q92890 307 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 RNFT2Q96EX2 444 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 ZC3HAV1LQ96H79 300 aaKnown RBP16.03■□□□□ 0.16
CDK4-201ENST00000257904 GPA33Q99795 319 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 FNDC11Q9BVV2 318 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.03■□□□□ 0.162e-9■□□□□ 10.4
CDK4-201ENST00000257904 MAN2C1Q9NTJ4 1040 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 TOR4AQ9NXH8 423 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 ITM2BQ9Y287 266 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 GSTK1Q9Y2Q3 226 aa16.03■□□□□ 0.16
CDK4-201ENST00000257904 IRGMA1A4Y4 181 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 AGRPO00253 132 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 PRODHO43272 600 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 FGF18O76093 207 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 ALAS2P22557 587 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 FGF9P31371 208 aaPredicted RBP16.02■□□□□ 0.15
CDK4-201ENST00000257904 PPM1AP35813 382 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 FRKP42685 505 aaPredicted RBP16.02■□□□□ 0.15
CDK4-201ENST00000257904 MAN2A2P49641 1150 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 SMSP52788 366 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 CAV3P56539 151 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 LSM11P83369 360 aaKnown RBP eCLIP16.02■□□□□ 0.15
CDK4-201ENST00000257904 FABP5Q01469 135 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 FAPQ12884 760 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 SYPL1Q16563 259 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 KHDRBS2Q5VWX1 349 aaKnown RBP16.02■□□□□ 0.15
CDK4-201ENST00000257904 TRIQKQ629K1 86 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 C1orf94Q6P1W5 598 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 IQCHQ86VS3 1027 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 C19orf18Q8NEA5 215 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 NLGN4YQ8NFZ3 816 aaPredicted RBP16.02■□□□□ 0.15
CDK4-201ENST00000257904 SORCS1Q8WY21 1168 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 IL17FQ96PD4 163 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 SOSTQ9BQB4 213 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 OR2AG1Q9H205 316 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 MTG2Q9H4K7 406 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 PPP1R3EQ9H7J1 279 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 RBFOX1Q9NWB1 397 aaKnown RBP16.02■□□□□ 0.15
CDK4-201ENST00000257904 COMMD3Q9UBI1 195 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 IL36AQ9UHA7 158 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 MAFFQ9ULX9 164 aa16.02■□□□□ 0.15
CDK4-201ENST00000257904 PLXND1Q9Y4D7 1925 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 PROM1O43490 865 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 TGM5O43548 720 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 LILRB3O75022 631 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 TRIM3O75382 744 aaPredicted RBP16.01■□□□□ 0.15
CDK4-201ENST00000257904 BSGP35613 385 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 CNIH2Q6PI25 160 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 CD200R1LQ6Q8B3 271 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 NRSN1Q8IZ57 195 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 Q8N402 240 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 LINC00471Q8N535 108 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 MORN4Q8NDC4 146 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 TMEM163Q8TC26 289 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 MRGPRX3Q96LB0 322 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 IL23AQ9NPF7 189 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 P2RX2Q9UBL9 471 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 ALG5Q9Y673 324 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 CARNS1A5YM72 827 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 ERVH48-1M5A8F1 160 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 SOD1P00441 154 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 LRG1P02750 347 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 CCNYL3P0C7X3 344 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 OR12D1P0DN82 309 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 PSKH1P11801 424 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 TYRP14679 529 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 CCT3P49368 545 aaKnown RBP16.01■□□□□ 0.15
CDK4-201ENST00000257904 ENTPD8Q5MY95 495 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 LCTLQ6UWM7 567 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 SLC36A4Q6YBV0 504 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 GLCCI1Q86VQ1 547 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 KIF18BQ86Y91 864 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 C2orf73Q8N5S3 287 aaPredicted RBP16.01■□□□□ 0.15
CDK4-201ENST00000257904 VN1R2Q8NFZ6 395 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 EXOSC8Q96B26 276 aaKnown RBP16.01■□□□□ 0.15
CDK4-201ENST00000257904 ZBED6CLQ96FA7 236 aaPredicted RBP16.01■□□□□ 0.15
CDK4-201ENST00000257904 F2RL3Q96RI0 385 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 PRRG3Q9BZD7 231 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 PLA2G12AQ9BZM1 189 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 ZBP1Q9H171 429 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 GIMAP4Q9NUV9 329 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 DKK3Q9UBP4 350 aa16.01■□□□□ 0.15
CDK4-201ENST00000257904 EXOSC1Q9Y3B2 195 aaKnown RBP16.01■□□□□ 0.15
CDK4-201ENST00000257904 MTCL1Q9Y4B5 1905 aaKnown RBP16■□□□□ 0.15
CDK4-201ENST00000257904 CASKO14936 926 aa16■□□□□ 0.15
CDK4-201ENST00000257904 CPNE3O75131 537 aaKnown RBP16■□□□□ 0.15
CDK4-201ENST00000257904 ACADLP28330 430 aa16■□□□□ 0.15
CDK4-201ENST00000257904 GZMKP49863 264 aa16■□□□□ 0.15
CDK4-201ENST00000257904 MZT2BQ6NZ67 158 aa16■□□□□ 0.15
CDK4-201ENST00000257904 SYCE2Q6PIF2 218 aa16■□□□□ 0.15
CDK4-201ENST00000257904 CADM2Q8N3J6 435 aa16■□□□□ 0.15
CDK4-201ENST00000257904 PLA2G15Q8NCC3 412 aa16■□□□□ 0.15
CDK4-201ENST00000257904 DUSP18Q8NEJ0 188 aa16■□□□□ 0.15
CDK4-201ENST00000257904 OR5D16Q8NGK9 328 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms