RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 FCRL1Q96LA6 429 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 ATP6V1G3Q96LB4 118 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 PPP1R36Q96LQ0 422 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 PPP3R2Q96LZ3 170 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 TSSK3Q96PN8 268 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 GAL3ST4Q96RP7 486 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 CCT7Q99832 543 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 WWTR1Q9GZV5 400 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 ANKRA2Q9H9E1 313 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 MIEF1Q9NQG6 463 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 SLC35C2Q9NQQ7 365 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 OLAHQ9NV23 265 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 PNPOQ9NVS9 261 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 HPF1Q9NWY4 346 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 EHD3Q9NZN3 535 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 BCAP29Q9UHQ4 241 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 ERVK-11Q9UQG0 969 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.88□□□□□ -1.15
TMEM258-201ENST00000257262 WBP11Q9Y2W2 641 aaKnown RBP7.88□□□□□ -1.15
TMEM258-201ENST00000257262 TMED5Q9Y3A6 229 aa7.88□□□□□ -1.15
TMEM258-201ENST00000257262 SHANK1Q9Y566 2161 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 CROCCQ5TZA2 2017 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 KLRC4-KLRK1H3BQV0 150 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 AKAP10O43572 662 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 WISP2O76076 250 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 LRATO95237 230 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 CBX7O95931 251 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 CRYABP02511 175 aaKnown RBP7.87□□□□□ -1.15
TMEM258-201ENST00000257262 BCKDHAP12694 445 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 EDN3P14138 238 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 PCSK2P16519 638 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 GPX3P22352 226 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 MST1P26927 711 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 NR0B1P51843 470 aaKnown RBP7.87□□□□□ -1.15
TMEM258-201ENST00000257262 GPR85P60893 370 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 DUSP8Q13202 625 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 PDCD2Q16342 344 aaPredicted RBP7.87□□□□□ -1.15
TMEM258-201ENST00000257262 ZNF791Q3KP31 576 aaPredicted RBP7.87□□□□□ -1.15
TMEM258-201ENST00000257262 TTMPQ5BVD1 217 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 ZNF628Q5EBL2 1059 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 HLA-DQA1Q5Y7H0 255 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 ANKRD26P1Q6NSI1 321 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 LURAP1LQ8IV03 231 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 SULF2Q8IWU5 870 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 GPALPP1Q8IXQ4 340 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 SAMD14Q8IZD0 417 aaPredicted RBP7.87□□□□□ -1.15
TMEM258-201ENST00000257262 CPSF7Q8N684 471 aaKnown RBP7.87□□□□□ -1.15
TMEM258-201ENST00000257262 SLC15A4Q8N697 577 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 ZNF441Q8N8Z8 693 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 FAM98AQ8NCA5 519 aaKnown RBP7.87□□□□□ -1.15
TMEM258-201ENST00000257262 PSD4Q8NDX1 1056 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 OR52R1Q8NGF1 315 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 OR9A2Q8NGT5 310 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 CLHC1Q8NHS4 586 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 C16orf52Q8NHV5 167 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 SLC22A8Q8TCC7 542 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 KAT2AQ92830 837 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 ADIPOR1Q96A54 375 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 TP53INP1Q96A56 240 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 BBS4Q96RK4 519 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 SLX1AQ9BQ83 275 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 C1orf50Q9BV19 199 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 CLMPQ9H6B4 373 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 VIPAS39Q9H9C1 493 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 GIMAP4Q9NUV9 329 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 NKIRAS1Q9NYS0 192 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 TAS2R7Q9NYW3 318 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 HAO1Q9UJM8 370 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 ENTPD4Q9Y227 616 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 DTX4Q9Y2E6 619 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 EML6Q6ZMW3 1958 aa7.87□□□□□ -1.15
TMEM258-201ENST00000257262 ASPDHA6ND91 283 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 ANKUB1A6NFN9 424 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 PEX1O43933 1283 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 SNNO75324 88 aaPredicted RBP7.86□□□□□ -1.15
TMEM258-201ENST00000257262 NME6O75414 186 aaPredicted RBP7.86□□□□□ -1.15
TMEM258-201ENST00000257262 BCAS2O75934 225 aaPredicted RBP7.86□□□□□ -1.15
TMEM258-201ENST00000257262 CNR1P21554 472 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 MAPK1P28482 360 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 RFC3P40938 356 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 MEOX1P50221 254 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 EMDP50402 254 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 TDGF1P3P51864 188 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 NCBP2P52298 156 aaKnown RBP eCLIP7.86□□□□□ -1.15
TMEM258-201ENST00000257262 ALDH6A1Q02252 535 aaKnown RBP7.86□□□□□ -1.15
TMEM258-201ENST00000257262 SRSF1Q07955 248 aaKnown RBP eCLIP7.86□□□□□ -1.15
TMEM258-201ENST00000257262 ELOAQ14241 798 aaKnown RBP7.86□□□□□ -1.15
TMEM258-201ENST00000257262 ATP6AP1LQ52LC2 224 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 ZNF385BQ569K4 471 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 RNFT1Q5M7Z0 435 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 IL23RQ5VWK5 629 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 ATG16L1Q676U5 607 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 TMEM64Q6YI46 380 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 RTL4Q6ZR62 310 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 FAM9CQ8IZT9 166 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 LIX1Q8N485 282 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 FNDC5Q8NAU1 212 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 ST6GALNAC3Q8NDV1 305 aa7.86□□□□□ -1.15
TMEM258-201ENST00000257262 OR7G2Q8NG99 324 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms