RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 IZUMO1Q8IYV9 350 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 AMER3Q8N944 861 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 OR6T1Q8NGN1 323 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 ADAMTS19Q8TE59 1207 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 HMGB4Q8WW32 186 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 SIGLEC11Q96RL6 698 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 SECISBP2Q96T21 854 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 KATNB1Q9BVA0 655 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 VN1R3Q9BXE9 311 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 RHBGQ9H310 441 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 TM7SF3Q9NS93 570 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 IMP3Q9NV31 184 aaKnown RBP11.33□□□□□ -0.6
USHBP1-201ENST00000252597 FTSJ1Q9UET6 329 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 PCDHGB2Q9Y5G2 931 aa11.33□□□□□ -0.6
USHBP1-201ENST00000252597 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 TEX28O15482 410 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 LYRM1O43325 122 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 REM1O75628 298 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 SEMG1P04279 462 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 HOXB9P17482 250 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 GABRB1P18505 474 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 EVI2BP34910 448 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 TALDO1P37837 337 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 EFR3AQ14156 821 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 E2F2Q14209 437 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 PRAMEF14Q5SWL7 426 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 PRAMEF13Q5VWM6 474 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 ZER1Q7Z7L7 766 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 CDH24Q86UP0 819 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 LRRTM4Q86VH4 590 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 SAMD12Q8N8I0 201 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 OR10H4Q8NGA5 316 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 CREB3L4Q8TEY5 395 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 TEFMQ96QE5 360 aaKnown RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 BHLHE41Q9C0J9 482 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 SPRTNQ9H040 489 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 GRIP1Q9Y3R0 1128 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 WASH3PC4AMC7 463 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 H0YIV9 168 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 GRM6O15303 877 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 ARAFP10398 606 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 PAICSP22234 425 aaKnown RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 ACVR1BP36896 505 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 DCDC1P59894 354 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 STXBP1P61764 594 aaKnown RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 NTHL1P78549 312 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 CAMK1Q14012 370 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 POU4F3Q15319 338 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 SYT14P1Q58G82 188 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 PGBD2Q6P3X8 592 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 TMEM150AQ86TG1 271 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 C17orf64Q86WR6 236 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 OR2A12Q8NGT7 310 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 ECHDC3Q96DC8 303 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 TCEAL4Q96EI5 215 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 C16orf58Q96GQ5 468 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 GPA33Q99795 319 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 SLX1AQ9BQ83 275 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 CDCA4Q9BXL8 241 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 MRPL9Q9BYD2 267 aaKnown RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 SERHL2Q9H4I8 314 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 ZNF224Q9NZL3 707 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 A0A0B4J293 547 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 HYKKA2RU49 373 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 PLA2G10O15496 165 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 GNSP15586 552 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 FUT1P19526 365 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 CST5P28325 142 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 MTNR1AP48039 350 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 FAPQ12884 760 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 CAMK2BQ13554 666 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 FGFBP1Q14512 234 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 CBARPQ8N350 705 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 BBS1Q8NFJ9 593 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 BTN2A2Q8WVV5 523 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 POP5Q969H6 163 aaKnown RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 RNF31Q96EP0 1072 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 SLC35G5Q96KT7 338 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 MED28Q9H204 178 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 ABCG5Q9H222 651 aa11.32□□□□□ -0.6
USHBP1-201ENST00000252597 HMX1Q9NP08 348 aaPredicted RBP11.32□□□□□ -0.6
USHBP1-201ENST00000252597 A0A0G2JMP0 313 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 A0A0X1KG70 313 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.31□□□□□ -0.6
USHBP1-201ENST00000252597 SH3D21A4FU49 640 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 POLR1CO15160 346 aaPredicted RBP11.31□□□□□ -0.6
USHBP1-201ENST00000252597 MAGEB4O15481 346 aaPredicted RBP11.31□□□□□ -0.6
USHBP1-201ENST00000252597 SEMA7AO75326 666 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 ADAP00813 363 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 AHRP35869 848 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 DDOSTP39656 456 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 ST8SIA6P61647 398 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 ID2Q02363 134 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 TAP2Q03519 686 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 OR4M2Q8NGB6 313 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 OR51L1Q8NGJ5 315 aa11.31□□□□□ -0.6
USHBP1-201ENST00000252597 AP3S1Q92572 193 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms