RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 RGS5O15539 181 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 LATO43561 262 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 DYRK3O43781 588 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 ALPPL2P10696 532 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 KRR1Q13601 381 aaKnown RBP13.57□□□□□ -0.24
HIF3A-202ENST00000244303 MLF2Q15773 248 aaPredicted RBP13.57□□□□□ -0.24
HIF3A-202ENST00000244303 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 VITQ6UXI7 678 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 SPATC1Q76KD6 591 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 IQCHQ86VS3 1027 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 TRIM69Q86WT6 500 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 CELF2-AS1Q8N7Q2 184 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 PROKR2Q8NFJ6 384 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 OR4K5Q8NGD3 323 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 OR6T1Q8NGN1 323 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 C12orf66Q96MD2 445 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 GPA33Q99795 319 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 OSGEPL1Q9H4B0 414 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 TRPV4Q9HBA0 871 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 C3orf14Q9HBI5 128 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 SLC35C2Q9NQQ7 365 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 MBNL1Q9NR56 388 aaKnown RBP13.57□□□□□ -0.24
HIF3A-202ENST00000244303 NDUFB11Q9NX14 153 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 TAS2R7Q9NYW3 318 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 THAP10Q9P2Z0 257 aaPredicted RBP13.57□□□□□ -0.24
HIF3A-202ENST00000244303 SEC14L4Q9UDX3 406 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 STUB1Q9UNE7 303 aa13.57□□□□□ -0.24
HIF3A-202ENST00000244303 CHD9Q3L8U1 2897 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 LRIT2A6NDA9 550 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 MYL12BO14950 172 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 CLEC3AO75596 197 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ERAL1O75616 437 aaKnown RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 PCDH8O95206 1070 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 CHRM4P08173 479 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 COPZ1P61923 177 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ALDH6A1Q02252 535 aaKnown RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 FUT5Q11128 374 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 GINS1Q14691 196 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 C9orf50Q5SZB4 431 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 RSBN1Q5VWQ0 802 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 LIPKQ5VXJ0 399 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ACSM5Q6NUN0 579 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 GDPGP1Q6ZNW5 385 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 NANOGNBQ7Z5D8 188 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 GPR151Q8TDV0 419 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 RAB7BQ96AH8 199 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ZNF486Q96H40 463 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 INSM2Q96T92 566 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 CCDC32Q9BV29 185 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 POLDIP3Q9BY77 421 aaKnown RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 RACGAP1Q9H0H5 632 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 SNTG1Q9NSN8 517 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 FBXL12Q9NXK8 326 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 GDE1Q9NZC3 331 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 SLC9A8Q9Y2E8 581 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 KLHL20Q9Y2M5 609 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 C4orf51C9J302 202 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ZNF670-ZNF695F2Z2N8 137 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 KRT8P05787 483 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ACP5P13686 325 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 DRD2P14416 443 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 GJA4P35212 333 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 DRD3P35462 400 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 TIE1P35590 1138 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 TGM4P49221 684 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 KHKP50053 298 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 TAS2R38P59533 333 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 TRA2BP62995 288 aaKnown RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 PRDX1Q06830 199 aaKnown RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 MLLT11Q13015 90 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 RUNX3Q13761 415 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 SYT14P1Q58G82 188 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 FAM26EQ8N5C1 309 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 MORN4Q8NDC4 146 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 OR52I1Q8NGK6 324 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 OR2A1Q8NGT9 310 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ASB15Q8WXK1 588 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 BBS4Q96RK4 519 aa13.56□□□□□ -0.24
HIF3A-202ENST00000244303 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 DNMT3AQ9Y6K1 912 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-202ENST00000244303 HYKKA2RU49 373 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 CYP7B1O75881 506 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 CCNKO75909 580 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 APOA1P02647 267 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 NTSP30990 170 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 BUD31P41223 144 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 CASP3P42574 277 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 RORCP51449 518 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 COX10Q12887 443 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 LASP1Q14847 261 aaKnown RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 ZNF750Q32MQ0 723 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 RNLSQ5VYX0 342 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 CD300LDQ6UXZ3 194 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 MEX3DQ86XN8 651 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms