RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TREX2Q9BQ50 279 aaPredicted RBP14.66□□□□□ -0.06
DDX55-201ENST00000238146 ZNF717Q9BY31 904 aaPredicted RBP14.66□□□□□ -0.06
DDX55-201ENST00000238146 INMT-MINDY4F8WBC2 141 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SGK494L7N484 410 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SELPP16109 830 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 DDCP20711 480 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 PTBP1P26599 531 aaKnown RBP eCLIP14.65□□□□□ -0.06
DDX55-201ENST00000238146 MAPK9P45984 424 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 MTNR1AP48039 350 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 AGFG1P52594 562 aaKnown RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 SMSP52788 366 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 MAPK12P53778 367 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 CTBP2P56545 445 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 HSPB3Q12988 150 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 NDUFA9Q16795 377 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 ASTLQ6HA08 431 aaPredicted RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 BRAT1Q6PJG6 821 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SLC9B2Q86UD5 537 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 AMIGO1Q86WK6 493 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 KIF18BQ86Y91 864 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 LRRC56Q8IYG6 542 aaPredicted RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 SLC38A6Q8IZM9 456 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 TBC1D19Q8N5T2 526 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 ARIH2OSQ8N7S6 290 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 OR2A12Q8NGT7 310 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 FNDC11Q9BVV2 318 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 ATP13A2Q9NQ11 1180 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SIRT3Q9NTG7 399 aaPredicted RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 C5AR2Q9P296 337 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 CASP8AP2Q9UKL3 1982 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SLC28A2O43868 658 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 UQCRC1P31930 480 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 NUDT1P36639 197 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 RAB25P57735 213 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SYPL1Q16563 259 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 ZNF284Q2VY69 593 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 ESCO2Q56NI9 601 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 C1orf94Q6P1W5 598 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 LHFPL3Q86UP9 236 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 MEX3DQ86XN8 651 aaKnown RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 FBXO15Q8NCQ5 510 aaPredicted RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 MORN4Q8NDC4 146 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 MYLIPQ8WY64 445 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 DHRS9Q9BPW9 319 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 LINC00597Q9H2U6 94 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SERHL2Q9H4I8 314 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 EGLN3Q9H6Z9 239 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 PAK6Q9NQU5 681 aaPredicted RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 DIABLOQ9NR28 239 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 SLC25A13Q9UJS0 675 aa14.65□□□□□ -0.06
DDX55-201ENST00000238146 EXOSC1Q9Y3B2 195 aaKnown RBP14.65□□□□□ -0.06
DDX55-201ENST00000238146 LEUTXA8MZ59 168 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 MEN1O00255 615 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 RTCAO00442 366 aaKnown RBP14.64□□□□□ -0.07
DDX55-201ENST00000238146 HOXA2O43364 376 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 EPHB3P54753 998 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 CNTN1Q12860 1018 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 INSL4Q14641 139 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 SPDYE7PQ495Y7 208 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 ENTPD8Q5MY95 495 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 SLC36A4Q6YBV0 504 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 SIX5Q8N196 739 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 SLC37A3Q8NCC5 494 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 AKAP1Q92667 903 aaKnown RBP eCLIP14.64□□□□□ -0.07
DDX55-201ENST00000238146 IGSF21Q96ID5 467 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 MAP6Q96JE9 813 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 WACQ9BTA9 647 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 TMED9Q9BVK6 235 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 PLXND1Q9Y4D7 1925 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.64□□□□□ -0.07
DDX55-201ENST00000238146 IRGMA1A4Y4 181 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 PLPP1O14494 284 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 PDPK1O15530 556 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 SLC6A11P48066 632 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 INPP1P49441 399 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 MRPL28Q13084 256 aaKnown RBP14.64□□□□□ -0.07
DDX55-201ENST00000238146 MINDY4Q4G0A6 757 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 ZNF658BQ4V348 819 aaPredicted RBP14.64□□□□□ -0.07
DDX55-201ENST00000238146 OLIG3Q7RTU3 272 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 C11orf74Q86VG3 221 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 MARCH9Q86YJ5 346 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 CFAP206Q8IYR0 622 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 C9orf62Q8N4C0 152 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 OR9A1PQ8NGU1 263 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 SMPDL3AQ92484 453 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 TM4SF18Q96CE8 201 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 HYLS1Q96M11 299 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 SAP130Q9H0E3 1048 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 TBC1D17Q9HA65 648 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 CTPS2Q9NRF8 586 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 INSL5Q9Y5Q6 135 aa14.64□□□□□ -0.07
DDX55-201ENST00000238146 CXorf51AA0A1B0GTR3 108 aa14.63□□□□□ -0.07
DDX55-201ENST00000238146 GRM6O15303 877 aa14.63□□□□□ -0.07
DDX55-201ENST00000238146 TBX6O95947 436 aaPredicted RBP14.63□□□□□ -0.07
DDX55-201ENST00000238146 GABRR2P28476 465 aa14.63□□□□□ -0.07
DDX55-201ENST00000238146 ZNF57Q68EA5 555 aaPredicted RBP14.63□□□□□ -0.07
DDX55-201ENST00000238146 GAREM2Q75VX8 874 aa14.63□□□□□ -0.07
DDX55-201ENST00000238146 ANKK1Q8NFD2 765 aa14.63□□□□□ -0.07
DDX55-201ENST00000238146 NEIL3Q8TAT5 605 aa14.63□□□□□ -0.07
DDX55-201ENST00000238146 RNF32Q9H0A6 362 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms