RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ASIC5Q9NY37 505 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 LUZP4Q9P127 313 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 PCDHGB6Q9Y5F9 930 aa10.47□□□□□ -0.73
SF3B6-201ENST00000233468 C2orf92A0A1B0GVN3 265 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 A8MVJ9 347 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 MYO1GB0I1T2 1018 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 LCE2BO14633 110 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 PDPK1O15530 556 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 COQ9O75208 318 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 SEMA7AO75326 666 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 ITGA10O75578 1167 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 TGDSO95455 350 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 IFI6P09912 130 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 KITP10721 976 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 NCBP2P52298 156 aaKnown RBP eCLIP10.46□□□□□ -0.732e-8■■■■■ 30
SF3B6-201ENST00000233468 SLC37A1P57057 533 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 DCAF7P61962 342 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 TUBA3CQ13748 450 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 OR1C1Q15619 314 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 PRICKLE4Q2TBC4 344 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 PRR30Q53SZ7 412 aaPredicted RBP10.46□□□□□ -0.73
SF3B6-201ENST00000233468 CES4AQ5XG92 561 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 RPUSD3Q6P087 351 aaKnown RBP10.46□□□□□ -0.73
SF3B6-201ENST00000233468 TUBA3EQ6PEY2 450 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 SPATA19Q7Z5L4 167 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 ATCAYQ86WG3 371 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 MMP21Q8N119 569 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 LIX1Q8N485 282 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 C17orf47Q8NEP4 570 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 ASB15Q8WXK1 588 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 UCN3Q969E3 161 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 TP53INP1Q96A56 240 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 SGCZQ96LD1 299 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 C3orf30Q96M34 536 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 GAL3ST4Q96RP7 486 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 OR10A5Q9H207 317 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 TRIM45Q9H8W5 580 aaPredicted RBP10.46□□□□□ -0.73
SF3B6-201ENST00000233468 AGPAT4Q9NRZ5 378 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 ZNF446Q9NWS9 450 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 HPF1Q9NWY4 346 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 PLA2G3Q9NZ20 509 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 LRFN1Q9P244 771 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 MAP10Q9P2G4 905 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 BCAP29Q9UHQ4 241 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 ERVK-11Q9UQG0 969 aa10.46□□□□□ -0.73
SF3B6-201ENST00000233468 SCAMP2O15127 329 aaKnown RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 AKAP10O43572 662 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 PLOD3O60568 738 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 OR2J2O76002 312 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 LRATO95237 230 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 TACR1P25103 407 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 GPC1P35052 558 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 CD96P40200 585 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 TMED10P49755 219 aaKnown RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 CLNS1AP54105 237 aaKnown RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 MANFP55145 182 aaKnown RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 RPP38P78345 283 aaKnown RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 PDE7AQ13946 482 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 RPS6KA2Q15349 733 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF750Q32MQ0 723 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 PLEKHN1Q494U1 663 aaPredicted RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 PIGGQ5H8A4 983 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF766Q5HY98 468 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 CPTPQ5TA50 214 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 NXNQ6DKJ4 435 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 SLC25A25Q6KCM7 469 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 OGFOD2Q6N063 350 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 DGAT2L6Q6ZPD8 337 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 ACAD11Q709F0 780 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 CYP4Z2PQ8N1L4 340 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 VPS37AQ8NEZ2 397 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 OR9A2Q8NGT5 310 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 CPT1CQ8TCG5 803 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 CKAP2Q8WWK9 683 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 GFM2Q969S9 779 aaKnown RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 CTHRC1Q96CG8 243 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 EGLN2Q96KS0 407 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 PPP1R36Q96LQ0 422 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 C1orf50Q9BV19 199 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 WWTR1Q9GZV5 400 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 TIMMDC1Q9NPL8 285 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 ACSS1Q9NUB1 689 aaPredicted RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 TAS2R9Q9NYW1 312 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 MAT2BQ9NZL9 334 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 MARCOQ9UEW3 520 aaPredicted RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 PLEKHB1Q9UF11 243 aaPredicted RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 BAIAP2L1Q9UHR4 511 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 ATP6V1HQ9UI12 483 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF223Q9UK11 482 aaPredicted RBP10.45□□□□□ -0.74
SF3B6-201ENST00000233468 VPS4AQ9UN37 437 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 MYO9AB2RTY4 2548 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 SCN3AQ9NY46 2000 aa10.45□□□□□ -0.74
SF3B6-201ENST00000233468 A0A087WV62 115 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 TTC36A6NLP5 189 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 KLRC4-KLRK1H3BQV0 150 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 WWP2O00308 870 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 PLOD2O00469 737 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 ACOX3O15254 700 aa10.44□□□□□ -0.74
SF3B6-201ENST00000233468 SLC25A12O75746 678 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms