RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 OR52J3Q8NH60 311 aa19.43■□□□□ 0.7
SNX3-201ENST00000230085 NFKBIDQ8NI38 313 aa19.43■□□□□ 0.7
SNX3-201ENST00000230085 UCK2Q9BZX2 261 aa19.43■□□□□ 0.7
SNX3-201ENST00000230085 MIXL1Q9H2W2 232 aa19.43■□□□□ 0.7
SNX3-201ENST00000230085 PAQR5Q9NXK6 330 aaPredicted RBP19.43■□□□□ 0.7
SNX3-201ENST00000230085 GULP1Q9UBP9 304 aa19.43■□□□□ 0.7
SNX3-201ENST00000230085 SLC6A14Q9UN76 642 aa19.43■□□□□ 0.7
SNX3-201ENST00000230085 CCDC163A0A0D9SF12 145 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 KRT87PA6NCN2 255 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 E7EQ34 232 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 HBQ1P09105 142 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 P2RY2P41231 377 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 SLC9A3P48764 834 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 SEMG2Q02383 582 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 DMPKQ09013 629 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 IKBIPQ70UQ0 350 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 PARS2Q7L3T8 475 aaKnown RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 RNF175Q8N4F7 328 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 FAM26EQ8N5C1 309 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 PLA2G15Q8NCC3 412 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 FBXO15Q8NCQ5 510 aaPredicted RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 DUSP18Q8NEJ0 188 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 PPP1R16AQ96I34 528 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 MTERF1Q99551 399 aaKnown RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 FUZQ9BT04 418 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 SGK2Q9HBY8 427 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 ACAD8Q9UKU7 415 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 A6NL46 340 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 FAAHO00519 579 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 POLR1CO15160 346 aaPredicted RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 RGS5O15539 181 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 SGTAO43765 313 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 ZNF217O75362 1048 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 OPN1SWP03999 348 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 OR1E2P47887 323 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 SPINT3P49223 89 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 ZNF528Q3MIS6 628 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 LRRC73Q5JTD7 316 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 USP30Q70CQ3 517 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 ERN2Q76MJ5 926 aaKnown RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 WDR5BQ86VZ2 330 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 ABCA7Q8IZY2 2146 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 JPH3Q8WXH2 748 aaPredicted RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 AP3S1Q92572 193 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 PDXPQ96GD0 296 aa19.42■□□□□ 0.7
SNX3-201ENST00000230085 STOX2Q9P2F5 926 aaPredicted RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 PLEKHB1Q9UF11 243 aaPredicted RBP19.42■□□□□ 0.7
SNX3-201ENST00000230085 TRBC2A0A5B9 178 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 IRGMA1A4Y4 181 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 PDE9AO76083 593 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 TNFRSF1BP20333 461 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 ACSL1P33121 698 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 RACK1P63244 317 aaKnown RBP19.41■□□□□ 0.7
SNX3-201ENST00000230085 ZNF91Q05481 1191 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 SRSF5Q13243 272 aaKnown RBP19.41■□□□□ 0.7
SNX3-201ENST00000230085 IKZF1Q13422 519 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 ZNF628Q5EBL2 1059 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 ZMAT1Q5H9K5 638 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 PIP5KL1Q5T9C9 394 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 DDI2Q5TDH0 399 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 AGBL4Q5VU57 503 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 AGTRAPQ6RW13 159 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 NATD1Q8N6N6 113 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 HUS1BQ8NHY5 278 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 MARVELD3Q96A59 401 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 SLC6A18Q96N87 628 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 OR4K3Q96R72 315 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 WRAP53Q9BUR4 548 aaKnown RBP19.41■□□□□ 0.7
SNX3-201ENST00000230085 HDAC8Q9BY41 377 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 C11orf54Q9H0W9 315 aaPredicted RBP19.41■□□□□ 0.7
SNX3-201ENST00000230085 ATG10Q9H0Y0 220 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 ABCG8Q9H221 673 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 NCKAP1Q9Y2A7 1128 aa19.41■□□□□ 0.7
SNX3-201ENST00000230085 IGHV1OR15-9A0A0B4J2B8 117 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 ARHGEF33A8MVX0 844 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 TBX19O60806 448 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 IGLV3-19P01714 112 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 ADRB3P13945 408 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 TIMP2P16035 220 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 LHCGRP22888 699 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 GZMKP49863 264 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 NDUFA9Q16795 377 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 C3orf38Q5JPI3 329 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 FAM71E1Q6IPT2 247 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 BRAT1Q6PJG6 821 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 LRRC56Q8IYG6 542 aaPredicted RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 LINC00471Q8N535 108 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 FGF11Q92914 225 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 GTPBP3Q969Y2 492 aaKnown RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 TRMT61AQ96FX7 289 aaKnown RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 TEFMQ96QE5 360 aaKnown RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 POLDIP3Q9BY77 421 aaKnown RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 ROGDIQ9GZN7 287 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 A4GALTQ9NPC4 353 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 EXOSC4Q9NPD3 245 aaKnown RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 TXNL4BQ9NX01 149 aaKnown RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 TESQ9UGI8 421 aaKnown RBP19.4■□□□□ 0.7
SNX3-201ENST00000230085 PHF11Q9UIL8 331 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 KLHL20Q9Y2M5 609 aa19.4■□□□□ 0.7
SNX3-201ENST00000230085 PCDHGB7Q9Y5F8 929 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms