RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 PREPP48147 710 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 PIN1Q13526 163 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 TAF12Q16514 161 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SNAPC1Q16533 368 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 MINDY4Q4G0A6 757 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 PLA1AQ53H76 456 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ZNF57Q68EA5 555 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 TYW3Q6IPR3 259 aaKnown RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ZNF680Q8NEM1 530 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 TMEM169Q96HH4 297 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 GPA33Q99795 319 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 EFCAB11Q9BUY7 163 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 RNF32Q9H0A6 362 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ADAM30Q9UKF2 790 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 A0A0A6YYJ9 748 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 PRR23AA6NEV1 266 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 PDPK1O15530 556 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 TSC22D2O75157 780 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 EPHX1P07099 455 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 CD70P32970 193 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SOX18P35713 384 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 CTSOP43234 321 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 GPR176Q14439 515 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 FCN2Q15485 313 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 TCTN1Q2MV58 587 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 IQCF2Q8IXL9 164 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 LILRA3Q8N6C8 439 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ARL14EPQ8N8R7 260 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 TMEM159Q96B96 161 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 UBL7Q96S82 380 aaPredicted RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ELAC1Q9H777 363 aaKnown RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ZFP64Q9NPA5 681 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC19A2O60779 497 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 NPPBP16860 134 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 MTNR1AP48039 350 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SMSP52788 366 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ATP12AP54707 1039 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 RGS1Q08116 209 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SYTL3Q4VX76 610 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ENTPD8Q5MY95 495 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC36A4Q6YBV0 504 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 MRGPREQ86SM8 312 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 OR4K5Q8NGD3 323 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 NEIL3Q8TAT5 605 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 LRRC20Q8TCA0 184 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 OMA1Q96E52 524 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 TRMT2BQ96GJ1 504 aaKnown RBP13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 SLAMF7Q9NQ25 335 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 MIEF1Q9NQG6 463 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 ING4Q9UNL4 249 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 POLHQ9Y253 713 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 NCKAP1Q9Y2A7 1128 aa13.22□□□□□ -0.29
SCNN1A-201ENST00000228916 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 SLC5A10A0PJK1 596 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 C7orf66A4D0T2 115 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 TSPAN6O43657 245 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 HLA-DPB1P04440 258 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 C1GALT1C1LP0DN25 315 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 TBPL1P62380 186 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 LRRC32Q14392 662 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 C1orf94Q6P1W5 598 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 MARCH9Q86YJ5 346 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 ZNF431Q8TF32 576 aaPredicted RBP13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 ZNF480Q8WV37 535 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 PRR14Q9BWN1 585 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 PPIL3Q9H2H8 161 aaKnown RBP13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 HEXA-AS1Q9H8Q6 139 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 MAN2C1Q9NTJ4 1040 aa13.21□□□□□ -0.29
SCNN1A-201ENST00000228916 ANKDD1BA6NHY2 528 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 SNTNA6NMZ2 147 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 ANHXE9PGG2 379 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 GTPBP1O00178 669 aaKnown RBP13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 GABRPO00591 440 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 TEX28O15482 410 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 TXNDC8Q6A555 127 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 FAM180BQ6P0A1 224 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 PRICKLE2Q7Z3G6 844 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 COMTD1Q86VU5 262 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 LINC00471Q8N535 108 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 MORN4Q8NDC4 146 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 RAB8BQ92930 207 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 CPEB1Q9BZB8 566 aaKnown RBP13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 SPNS1Q9H2V7 528 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 RANBP3Q9H6Z4 567 aaPredicted RBP13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 YIPF1Q9Y548 306 aa13.21□□□□□ -0.3
SCNN1A-201ENST00000228916 KIF26AQ9ULI4 1882 aaPredicted RBP13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 HMGN4O00479 90 aa13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 AKAP8O43823 692 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 TPOP07202 933 aa13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 SLC1A3P43003 542 aa13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 ZNF155Q12901 538 aaPredicted RBP13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 KIF18BQ86Y91 864 aa13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 DNAJC5GQ8N7S2 189 aa13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 ZNF461Q8TAF7 563 aa13.2□□□□□ -0.3
SCNN1A-201ENST00000228916 OR5P2Q8WZ92 322 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms