RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 DCTP40126 519 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 MAN2A2P49641 1150 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 IST1P53990 364 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 MAT1AQ00266 395 aaKnown RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 DAG1Q14118 895 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 PRICKLE4Q2TBC4 344 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 IQCCQ4KMZ1 466 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 CDC73Q6P1J9 531 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 TBPL2Q6SJ96 375 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 KRT73Q86Y46 540 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 HIPK1Q86Z02 1210 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 KMT2EQ8IZD2 1858 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 SMYD1Q8NB12 490 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 BTBD2Q9BX70 525 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 RBCK1Q9BYM8 510 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 BCL2L10Q9HD36 194 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 THSD1Q9NS62 852 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 IFT80Q9P2H3 777 aaPredicted RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 LIPT1Q9Y234 373 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 R4GN57 208 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 DLGAP1O14490 977 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 CTNSO60931 367 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 AGR2O95994 175 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ALPLP05186 524 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ANKRD34CP0C6C1 535 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 FOLR1P15328 257 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ITGA2P17301 1181 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ARHGDIAP52565 204 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 SLC13A2Q13183 592 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 PDK3Q15120 406 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ATAD3BQ5T9A4 648 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 FHL5Q5TD97 284 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 SHQ1Q6PI26 577 aaKnown RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 TTLL10Q6ZVT0 673 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 TMPRSS9Q7Z410 1059 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 OR51Q1Q8NH59 317 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 OR1L3Q8NH93 324 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ADAMTS15Q8TE58 950 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 OTUB1Q96FW1 271 aaPredicted RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 ZNF347Q96SE7 839 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 RBM4BQ9BQ04 359 aaKnown RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 RBM4Q9BWF3 364 aaKnown RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 ARRDC1-AS1Q9H2J1 176 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 RUBCNLQ9H714 662 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 PRTFDC1Q9NRG1 225 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 MAT2BQ9NZL9 334 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 SERTAD3Q9UJW9 196 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ATXN7L1Q9ULK2 861 aaPredicted RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 GPC6Q9Y625 555 aaPredicted RBP16.99■□□□□ 0.31
VIM-201ENST00000224237 U3KQV3 271 aa16.99■□□□□ 0.31
VIM-201ENST00000224237 ADAMTS20P59510 1910 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 OR10H2O60403 315 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 DIRAS1O95057 198 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 RPLP0P05388 317 aaKnown RBP16.98■□□□□ 0.31
VIM-201ENST00000224237 ETS2P15036 469 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 SOX18P35713 384 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 FUT5Q11128 374 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 STX4Q12846 297 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 DUSP7Q16829 419 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 SYT16Q17RD7 645 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 TRMT12Q53H54 448 aaKnown RBP16.98■□□□□ 0.31
VIM-201ENST00000224237 YOD1Q5VVQ6 348 aaPredicted RBP16.98■□□□□ 0.31
VIM-201ENST00000224237 PRR23CQ6ZRP0 262 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 METTL27Q8N6F8 245 aaPredicted RBP16.98■□□□□ 0.31
VIM-201ENST00000224237 OR4D9Q8NGE8 314 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 CNBD2Q96M20 576 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 DPYSL5Q9BPU6 564 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 ADI1Q9BV57 179 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 SPATA5L1Q9BVQ7 753 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 REEP1Q9H902 201 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 EXD2Q9NVH0 621 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 USE1Q9NZ43 259 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 CALML5Q9NZT1 146 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 NDUFAF4Q9P032 175 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 SEC14L3Q9UDX4 400 aa16.98■□□□□ 0.31
VIM-201ENST00000224237 TMEM184BQ9Y519 407 aaPredicted RBP16.98■□□□□ 0.31
VIM-201ENST00000224237 MAGED1Q9Y5V3 778 aaPredicted RBP16.98■□□□□ 0.31
VIM-201ENST00000224237 A0A0G2JPF8 293 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 A0A1W2PQM1 296 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 HNRNPCL2B2RXH8 293 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 HNRNPCL3B7ZW38 293 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 HNRNPCL4P0DMR1 293 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CKMT1AP12532 417 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CD247P20963 164 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 DNAJA1P31689 397 aaKnown RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 MPLP40238 635 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 GCGRP47871 477 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CCL7P80098 99 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 IGLV3-21P80748 117 aaPredicted RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 PPP2R2BQ00005 443 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 KCNC4Q03721 635 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 MERTKQ12866 999 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 GPAT3Q53EU6 434 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 ST13P4Q8IZP2 240 aaPredicted RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 TFAP2CQ92754 450 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 CTHRC1Q96CG8 243 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 ZNF501Q96CX3 271 aaPredicted RBP16.97■□□□□ 0.31
VIM-201ENST00000224237 RDH12Q96NR8 316 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 COL21A1Q96P44 957 aa16.97■□□□□ 0.31
VIM-201ENST00000224237 NDC1Q9BTX1 674 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms