RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 G3V2L1 256 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 NUAK1O60285 661 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 CTC1Q2NKJ3 1217 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 ACVR1CQ8NER5 493 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 C16orf78Q8WTQ4 265 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 OR52A4PA6NMU1 304 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 LDB3O75112 727 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 APOC3P02656 99 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 AMY2BP19961 511 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 NDUFS1P28331 727 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 KDELR2P33947 212 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 MVKQ03426 396 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 ERV3-1Q14264 604 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 MBTPS1Q14703 1052 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 PIP5KL1Q5T9C9 394 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 IL20RBQ6UXL0 311 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 SYT14Q8NB59 555 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 FZD9O00144 591 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 IL7P13232 177 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 FBLP22087 321 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 F8A1P23610 371 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 MAP2K3P46734 347 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 CRISP1P54107 249 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 CLDN2P57739 230 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 NFATC4Q14934 902 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.97□□□□□ -0.331e-6■■□□□ 12.7
TGFBR3-201ENST00000212355 OR5M10Q6IEU7 315 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 ZDHHC14Q8IZN3 488 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 PITX2Q99697 317 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 SEZ6LQ9BYH1 1024 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 ARL6Q9H0F7 186 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 CWH43Q9H720 699 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 RXFP3Q9NSD7 469 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 MTMR10Q9NXD2 777 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 UBQLN2Q9UHD9 624 aa12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 XRN1Q8IZH2 1706 aaKnown RBP12.97□□□□□ -0.33
TGFBR3-201ENST00000212355 A0A0U1RQK1 487 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 C2orf74A8MZ97 194 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 H3BML4 177 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 JUNDP17535 347 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 COL28A1Q2UY09 1125 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 NXPE4Q6UWF7 544 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 TAS1R1Q7RTX1 841 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 OR8J3Q8NGG0 315 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC29A1Q99808 456 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF717Q9BY31 904 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 B3GAT2Q9NPZ5 323 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 PHLPP1O60346 1717 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 FDXRP22570 491 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 SFTPDP35247 375 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 KCNC1P48547 511 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF616Q08AN1 781 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 PCDHGA6Q9Y5G7 932 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 GXYLT2A0PJZ3 443 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF840PA6NDX5 716 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ADAP00813 363 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 JMJD7P0C870 316 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 PVALBP20472 110 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 S1PR1P21453 382 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 AQP2P41181 271 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 SPHARQ15513 63 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ZMYND19Q96E35 227 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 YTHDF1Q9BYJ9 559 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ENY2Q9NPA8 101 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 SEC14L4Q9UDX3 406 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 AGPAT2O15120 278 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 NUPL2O15504 423 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 SPDEFO95238 335 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF888P0CJ79 500 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 NPR2P20594 1047 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 OPRL1P41146 370 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 ISCA2Q86U28 154 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 LRRC25Q8N386 305 aaPredicted RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 CSNK1A1LQ8N752 337 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 OR52N2Q8NGI0 321 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 OR4D6Q8NGJ1 314 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 PCNPQ8WW12 178 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 OR5P2Q8WZ92 322 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 PRSS21Q9Y6M0 314 aa12.96□□□□□ -0.33
TGFBR3-201ENST00000212355 MYH7BA7E2Y1 1941 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 MICAL3Q7RTP6 2002 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 hCG_1807616A0A1W2PRN6 198 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 TRIM64BA6NI03 449 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 RBBP9O75884 186 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 HTR1EP28566 365 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 PIK3CBP42338 1070 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 TMEFF1Q8IYR6 380 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 PGAM5Q96HS1 289 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 OR51E2Q9H255 320 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 ACTL8Q9H568 366 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 PPP4R1LQ9P1A2 415 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 MAB21L2Q9Y586 359 aa12.96□□□□□ -0.34
TGFBR3-201ENST00000212355 SLC16A8O95907 504 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 PFKLP17858 780 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ETV5P41161 510 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 ARRB1P49407 418 aaPredicted RBP12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 MDGA1Q8NFP4 955 aa12.95□□□□□ -0.34
TGFBR3-201ENST00000212355 OR2M4Q96R27 311 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms