RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 EML4Q9HC35 981 aaKnown RBP17.48■□□□□ 0.39
TRAPPC6A-201ENST00000006275 RRAGDQ9NQL2 400 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ACTL7BQ9Y614 415 aa17.48■□□□□ 0.39
TRAPPC6A-201ENST00000006275 DNAJC13O75165 2243 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ITGA10O75578 1167 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 CHEK2O96017 543 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 CHRNGP07510 517 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SLC35E2P0CK97 266 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 TIA1P31483 386 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ALDH9A1P49189 494 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 XKP51811 444 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 RAE1P78406 368 aaKnown RBP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 CMPK2Q5EBM0 449 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ARL13AQ5H913 290 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SLC48A1Q6P1K1 146 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 TRIM46Q7Z4K8 759 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ZNF227Q86WZ6 799 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 TMEM156Q8N614 296 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 OR8K3Q8NH51 312 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 DOK4Q8TEW6 326 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 RIT1Q92963 219 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SENP5Q96HI0 755 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 EBPLQ9BY08 206 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 POLDIP3Q9BY77 421 aaKnown RBP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 TRIM45Q9H8W5 580 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 LIN28AQ9H9Z2 209 aaKnown RBP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 KCNK9Q9NPC2 374 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 DLL4Q9NR61 685 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ST6GALNAC2Q9UJ37 374 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 PSME2Q9UL46 239 aa17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 YARS2Q9Y2Z4 477 aaKnown RBP17.47■□□□□ 0.39
TRAPPC6A-201ENST00000006275 JMJD1CQ15652 2540 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 A0A1W2PS29 197 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 GOLGA6L10A6NI86 522 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 KLRC4-KLRK1H3BQV0 150 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SLC28A1O00337 649 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 TM9SF1O15321 606 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ERAL1O75616 437 aaKnown RBP17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 RSL1D1O76021 490 aaKnown RBP17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 IL3P08700 152 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 FOSL1P15407 271 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 GALNSP34059 522 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SERPINB5P36952 375 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 HLCSP50747 726 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ERVK-8P63133 956 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 RNF4P78317 190 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ZNF267Q14586 743 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SPRED3Q2MJR0 410 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ARHGAP11AQ6P4F7 1023 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ACAD11Q709F0 780 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 NUDCD3Q8IVD9 361 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SULF2Q8IWU5 870 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 HOMEZQ8IX15 550 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 OR5L2Q8NGL0 311 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 PPP1R14CQ8TAE6 165 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 C16orf78Q8WTQ4 265 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 FBXL20Q96IG2 436 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 PKNOX2Q96KN3 472 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 STMN4Q9H169 189 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 LIME1Q9H400 295 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 SIRT5Q9NXA8 310 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 MYOTQ9UBF9 498 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 CES1P1Q9UKY3 287 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 ERVK-19Q9WJR5 959 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 DLGAP4Q9Y2H0 992 aa17.46■□□□□ 0.39
TRAPPC6A-201ENST00000006275 WDR91A4D1P6 747 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 HRKO00198 91 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 WWP2O00308 870 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PEX1O43933 1283 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PDE9AO76083 593 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 IGKV3-11P04433 115 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 ANXA4P09525 319 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 CPMP14384 443 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PORP16435 677 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 NT5EP21589 574 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 TRHRP34981 398 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 SERPINB4P48594 390 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 SSR4P51571 173 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 HK2P52789 917 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 NUP107P57740 925 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 HEPACAMQ14CZ8 416 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 ZNF750Q32MQ0 723 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 C6orf163Q5TEZ5 329 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 KANK2Q63ZY3 851 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 GALNT18Q6P9A2 607 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 C16orf47Q6ZP98 133 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 OR5M3Q8NGP4 307 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 KLHL29Q96CT2 875 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 C11orf24Q96F05 449 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 HEY2Q9UBP5 337 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 RPH3AQ9Y2J0 694 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 PTGDR2Q9Y5Y4 395 aa17.45■□□□□ 0.38
TRAPPC6A-201ENST00000006275 ZNF469Q96JG9 3925 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC6A-201ENST00000006275 RGS14O43566 566 aa17.44■□□□□ 0.38
TRAPPC6A-201ENST00000006275 CTAG2O75638 210 aa17.44■□□□□ 0.38
TRAPPC6A-201ENST00000006275 OR2J2O76002 312 aa17.44■□□□□ 0.38
TRAPPC6A-201ENST00000006275 FGF4P08620 206 aa17.44■□□□□ 0.38
TRAPPC6A-201ENST00000006275 DNASE1P24855 282 aa17.44■□□□□ 0.38
TRAPPC6A-201ENST00000006275 FEN1P39748 380 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms