RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Bpifb2Q8C1E1 462 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Snrnp27Q8K194 155 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Angptl7Q8R1Q3 337 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Slc2a10Q8VHD6 536 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cdc42ep1Q91W92 409 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Asb8Q91ZT9 288 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Capns2Q9D7J7 247 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Fabp12Q9DAK4 132 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Prl8a8Q9DAS4 241 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Natd1Q9DBW3 110 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 TesminQ9WTJ6 475 aa15.01□□□□□ -0.01
Trim39-203ENSMUST00000113706 Pgbd1E9Q492 415 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Olfr549E9Q542 316 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ptpn20O55082 426 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 H2-D1P14427 368 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Acvr2aP27038 513 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Pcbp3P57722 371 aaKnown RBP15□□□□□ -0.01
Trim39-203ENSMUST00000113706 CrtamQ149L7 389 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ugt2b36Q3UEP4 530 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 PigtQ8BXQ2 582 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Q8CF31 99 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 HpgdQ8VCC1 269 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cyc1Q9D0M3 325 aaKnown RBP15□□□□□ -0.01
Trim39-203ENSMUST00000113706 GrifinQ9D1U0 144 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ascc3E9PZJ8 2198 aaKnown RBP15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmn2r18E9Q280 788 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Klk1P15947 261 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 RxrgP28705 463 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ptpn2Q06180 406 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cfap206Q6PE87 622 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Olfr1307Q7TQX1 312 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Pomt2Q8BGQ4 820 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Slc26a9Q8BU91 790 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Slc5a2Q923I7 670 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmp1Q99KU0 406 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Lrrc18Q9CQ07 262 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Riok2Q9CQS5 547 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Srpk3Q9Z0G2 565 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Zfp993A2A8V4 313 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 A530032D15RikE9Q422 215 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmn1r25H3BLP0 302 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmn2r92L7N2A4 860 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 HpnO35453 436 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Il2raP01590 268 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ly6fP35460 134 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 OcmP51879 109 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Serpina3mQ03734 418 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tmem181aQ3U3W2 474 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 C1qtnf7Q8BVD7 289 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Slc5a8Q8BYF6 611 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Olfr541Q8VGM0 312 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cops7aQ9CZ04 275 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Mrpl46Q9EQI8 283 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ehd3Q9QXY6 535 aa15□□□□□ -0.01
Trim39-203ENSMUST00000113706 EXOC1LB9EK06 172 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Coq10aE9Q3H6 259 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gm8926L7MUE8 181 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gpr27O54897 379 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Rb1P13405 921 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Rps15aP62245 130 aaKnown RBP14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Kcnh1Q60603 989 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Smad2Q62432 467 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Q6P2K3 674 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Zfp101Q8BP18 612 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tigd4Q8BUZ3 513 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Thap1Q8CHW1 210 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Nuf2Q99P69 463 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Spcs2Q9CYN2 226 aaKnown RBP14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Eral1Q9CZU4 437 aaKnown RBP14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 2610042L04RikQ9D073 150 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Snx5Q9D8U8 404 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Q9DAD0 168 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmn1r29Q9EQ41 303 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Dll4Q9JI71 686 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Sphk2Q9JIA7 617 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Rev3lQ61493 3122 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Smok4aA0JLX3 433 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 5430403G16RikD3Z5L4 667 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Kctd17E0CYQ0 296 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Vmn2r56E9Q4U5 779 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 CgaP01216 120 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Rps6ka3P18654 740 aaKnown RBP14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Oprd1P32300 372 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tmem64Q3U145 381 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ddx5Q61656 614 aaKnown RBP14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gpalpp1Q69ZC8 346 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Szrd1Q6NXN1 152 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Olfr591Q7TRR7 314 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Q8C3I9 435 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cby3Q9CVN6 235 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Gpn3Q9D3W4 284 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Adad2Q9D5P4 478 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 FastkQ9JIX9 511 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Dock8Q8C147 2100 aa14.99□□□□□ -0.01
Trim39-203ENSMUST00000113706 Stxbp1O08599 594 aa14.98□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cct3P80318 545 aaKnown RBP14.98□□□□□ -0.01
Trim39-203ENSMUST00000113706 Cnrip1Q5M8N0 164 aa14.98□□□□□ -0.01
Trim39-203ENSMUST00000113706 Tvp23aQ6NVH0 222 aa14.98□□□□□ -0.01
Trim39-203ENSMUST00000113706 Ablim2Q8BL65 612 aa14.98□□□□□ -0.01
Trim39-203ENSMUST00000113706 Pik3cbQ8BTI9 1064 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms