RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Vopp1Q8R1C3 172 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tmem268Q8R239 342 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Rab13Q9DD03 202 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cyhr1Q9QXA1 311 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Sema4gQ9WUH7 837 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 IghdA0A0A6YW14 291 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Zfp981A2A8V7 445 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Lcn11A2BHR2 178 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Zfp952B0V2W4 504 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 4930402K13RikB1AW18 415 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Pate1E9Q658 125 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Itga10E9Q6R1 1167 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm3327F7C9A1 213 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 NnmtO55239 264 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 TyrP11344 533 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 VegfbP49766 207 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tbpl1P62340 186 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Arf5P84084 180 aaKnown RBP12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Slc2a9Q3T9X0 538 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Secisbp2Q3U1C4 858 aaKnown RBP12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Eri2Q5BKS4 688 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr538Q7TRT5 310 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Chrnb3Q8BMN3 464 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Rbm34Q8C5L7 375 aaKnown RBP12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Trib2Q8K4K3 343 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Igsf8Q8R366 611 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ankrd54Q91WK7 299 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 NaxdQ9CZ42 343 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Lpar3Q9EQ31 354 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Adam18Q9R157 719 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Map2k5Q9WVS7 448 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Thsd7bQ6P4U0 1607 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Vmn2r92L7N2A4 860 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tnfaip1O70479 316 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 P01636 108 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 H2-Q7P14429 334 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 H2-Q9P14431 200 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 HgfQ08048 728 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Malt1Q2TBA3 832 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tstd2Q3U269 495 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Zp1Q62005 623 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Zc3hc1Q80YV2 501 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cpeb2Q812E0 521 aaKnown RBP12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Coq4Q8BGB8 266 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Zfp763Q8BIC7 588 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Plekhs1Q8BW88 474 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Sh3rf2Q8BZT2 735 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Nrn1lQ8C4W3 162 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ccm2Q8K2Y9 453 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Oard1Q8R5F3 152 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ogfrl1Q8VE52 464 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mtfr2Q8VED8 361 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr599Q8VG01 315 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr525Q8VGL5 309 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Laptm4bQ91XQ6 227 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cers5Q9D6K9 414 aa12.16□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Syndig1A2ANU3 258 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm9493F6SVV1 192 aaKnown RBP12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cx3cl1O35188 395 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Bcl6P41183 707 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Six5P70178 719 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Yes1Q04736 541 aaKnown RBP12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mat2aQ3THS6 395 aaKnown RBP12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Grxcr1Q50H32 290 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ip6k1Q6PD10 433 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 GalpQ810H5 117 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Npas4Q8BGD7 802 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 PiguQ8K358 434 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Wdr45bQ9CR39 344 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Q9D112 206 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 9030624G23RikQ9D308 155 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Nacc2Q9DCM7 586 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Trgv2A2J008 116 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm8973D3YX71 104 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm6356L7N2A7 188 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Pgam2O70250 253 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gpd1P13707 349 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 BckdhaP50136 442 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cry1P97784 606 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Pou4f3Q63955 338 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tas2r39Q7TQA5 319 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Pomt2Q8BGQ4 820 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Clrn3Q8BHH8 226 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Znf786Q8BV42 777 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Orai1Q8BWG9 304 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Sall4Q8BX22 1067 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cnppd1Q8K158 407 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Vmn1r201Q8R262 300 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Chrna3Q8R4G9 499 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Slc8b1Q925Q3 585 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Fuca1Q99LJ1 452 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tcam1Q99NB3 548 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Rps19Q9CZX8 145 aaKnown RBP12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ptges3lQ9D9A7 131 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Q9DAD0 168 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Med27Q9DB40 311 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Msgn1Q9JK54 188 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Sorcs1Q9JLC4 1167 aa12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 RbpmsQ9WVB0 197 aaKnown RBP12.15□□□□□ -0.46
Clcn3-201ENSMUST00000004430 A0A286YCD0 109 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms