RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ZNF681	Q96N22	645 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	MECR	Q9BV79	373 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	BRINP2	Q9C0B6	783 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	PFDN4	Q9NQP4	134 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	SACM1L	Q9NTJ5	587 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	MAT2B	Q9NZL9	334 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	SENP1	Q9P0U3	644 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939		A0A0G2JMM0	328 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939		A0A1W2PPB8	328 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939		A0A1W2PRS3	328 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	PINLYP	A6NC86	204 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	KIR3DP1	A8MWS1	328 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	AZIN1	O14977	448 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	RGS16	O15492	202 aa	Predicted RBP	13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	HS6ST1	O60243	411 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	NPHS1	O60500	1241 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	FBXO45	P0C2W1	286 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	CCL3	P10147	92 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	CREB1	P16220	341 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	NR0B1	P51843	470 aa	Known RBP	13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	CASP6	P55212	293 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	DUSP2	Q05923	314 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	MGAT2	Q10469	447 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM180B	Q6P0A1	224 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM111B	Q6SJ93	734 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	GK5	Q6ZS86	529 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM47E	Q6ZV65	393 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	SPPL2C	Q8IUH8	684 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	HOMEZ	Q8IX15	550 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM76A	Q8TAV0	307 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	METTL2A	Q96IZ6	378 aa	Known RBP	13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM173A	Q9BQD7	235 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	SH2D2A	Q9NP31	389 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	GIMAP4	Q9NUV9	329 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	EHD3	Q9NZN3	535 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF639	Q9UID6	485 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	CFL2	Q9Y281	166 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF835	Q9Y2P0	537 aa		13.87	□□□□□ -0.19
PHGDH-231	ENST00000641939	NCKAP5	O14513	1909 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939		A1L4Q6	167 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939		G3V3Y1	287 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	SLC28A1	O00337	649 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	RGS14	O43566	566 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	TYROBP	O43914	113 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	CHEK2	O96017	543 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	PRPH2	P23942	346 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	PTGER1	P34995	402 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	PPIA	P62937	165 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	HSF1	Q00613	529 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	PLGLB1	Q02325	96 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	CMPK2	Q5EBM0	449 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	SLC22A10	Q63ZE4	541 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939		Q6ZPB1	254 aa	Predicted RBP	13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	RGS9BP	Q6ZS82	235 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	RNF165	Q6ZSG1	346 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	CCDC116	Q8IYX3	515 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM13C	Q8NE31	585 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	C17orf47	Q8NEP4	570 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	ADCY4	Q8NFM4	1077 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	CDC26	Q8NHZ8	85 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	PAQR8	Q8TEZ7	354 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	ADIPOR1	Q96A54	375 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	EXOSC8	Q96B26	276 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	CTHRC1	Q96CG8	243 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	TTTY12	Q9BZ98	90 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	EML4	Q9HC35	981 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	SLC35C2	Q9NQQ7	365 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	BCAP29	Q9UHQ4	241 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	SH3BGRL2	Q9UJC5	107 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	ENTPD4	Q9Y227	616 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	WBP11	Q9Y2W2	641 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	FIS1	Q9Y3D6	152 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	CCL27	Q9Y4X3	112 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	POLR3H	Q9Y535	204 aa	Predicted RBP	13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	PTGDR2	Q9Y5Y4	395 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	UNC79	Q9P2D8	2635 aa		13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	NCOA6	Q14686	2063 aa	Predicted RBP	13.86	□□□□□ -0.19
PHGDH-231	ENST00000641939	CACNA1C	Q13936	2221 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	FAM166B	A8MTA8	275 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	CAPN14	A8MX76	684 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	NPIPB8	E9PQR5	432 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	ACOT7	O00154	380 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	CCL21	O00585	134 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZG16	O60844	167 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	SEC22B	O75396	215 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	GLS	O94925	669 aa	Predicted RBP	13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	CHRNG	P07510	517 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	FGF4	P08620	206 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	ABO	P16442	354 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	PCSK2	P16519	638 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	DDC	P20711	480 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	GPX3	P22352	226 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	SOX18	P35713	384 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	DNASE1L1	P49184	302 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	NRG3	P56975	720 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	C2orf80	Q0P641	193 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	DUSP8	Q13202	625 aa		13.85	□□□□□ -0.19
PHGDH-231	ENST00000641939	EXOSC7	Q15024	291 aa	Known RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms