RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 MTPNP58546 118 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 NCALDP61601 193 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 PRR5P85299 388 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 TBC1D25Q3MII6 688 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 LACTB2Q53H82 288 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-230ENST00000641927 NANOGP8Q6NSW7 305 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 YTHDF3Q7Z739 585 aaKnown RBP16.32■□□□□ 0.2
PHGDH-230ENST00000641927 PGAM4Q8N0Y7 254 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 PSMA8Q8TAA3 256 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 ZNF675Q8TD23 568 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 FAM120BQ96EK7 910 aaKnown RBP16.32■□□□□ 0.2
PHGDH-230ENST00000641927 ANKRD27Q96NW4 1050 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 PHF12Q96QT6 1004 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 TRIM4Q9C037 500 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 NANOGQ9H9S0 305 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 TPT1P8Q9HAU6 139 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 BCAP29Q9UHQ4 241 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 WASF3Q9UPY6 502 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 NUP214P35658 2090 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-230ENST00000641927 CLIC1O00299 241 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 EMC8O43402 210 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 SLITRK5O94991 958 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 C1QCP02747 245 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 CASP9P55211 416 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 EEF1A2Q05639 463 aaKnown RBP16.31■□□□□ 0.2
PHGDH-230ENST00000641927 MAP4K2Q12851 820 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 EXOSC7Q15024 291 aaKnown RBP16.31■□□□□ 0.2
PHGDH-230ENST00000641927 BHLHB9Q6PI77 547 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 TMEM64Q6YI46 380 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 CPEB2Q7Z5Q1 589 aaKnown RBP16.31■□□□□ 0.2
PHGDH-230ENST00000641927 NUP43Q8NFH3 380 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 ZFP90Q8TF47 636 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 PTPMT1Q8WUK0 201 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-230ENST00000641927 DAZLQ92904 295 aaKnown RBP16.31■□□□□ 0.2
PHGDH-230ENST00000641927 OR8D2Q9GZM6 311 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 C1orf21Q9H246 121 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 SPAG4Q9NPE6 437 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 EQTNQ9NQ60 294 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 ADA2Q9NZK5 511 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 PTGFRNQ9P2B2 879 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 ERVK-19Q9WJR5 959 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 MSRB2Q9Y3D2 182 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 L3MBTL1Q9Y468 752 aa16.31■□□□□ 0.2
PHGDH-230ENST00000641927 MRPS18BQ9Y676 258 aaKnown RBP16.31■□□□□ 0.2
PHGDH-230ENST00000641927 TRBV5-3A0A0A0MS03 114 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 EVPLLA8MZ36 301 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 HRKO00198 91 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 UPK1AO00322 258 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 PLOD2O00469 737 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 IGHEP01854 428 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 HOXB9P17482 250 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SLC6A2P23975 617 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 MMP11P24347 488 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 GALNSP34059 522 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SLC7A2P52569 658 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 DMTNQ08495 405 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 MGAT2Q10469 447 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 DNAL1Q4LDG9 190 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 RUNDC3AQ59EK9 446 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 RABL3Q5HYI8 236 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 TMEM205Q6UW68 189 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 KIF2BQ8N4N8 673 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SIMC1Q8NDZ2 872 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 OR56A1Q8NGH5 318 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 OR14A16Q8NHC5 309 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SFXN5Q8TD22 340 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 MOAP1Q96BY2 351 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 LPAR4Q99677 370 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SH3GL1Q99961 368 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 GPATCH1Q9BRR8 931 aaKnown RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SPTBN4Q9H254 2564 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 AHCTF1Q8WYP5 2266 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 C15orf38-AP3S2A0A0A6YYH1 394 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 TERTO14746 1132 aaKnown RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SEC24DO94855 1032 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 KRT75O95678 551 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SSTR4P31391 388 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SELPLGQ14242 412 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SSPNQ14714 243 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 C8orf82Q6P1X6 216 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 PAPD4Q6PIY7 484 aaKnown RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 C6orf120Q7Z4R8 191 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 ARPINQ7Z6K5 226 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 VASH2Q86V25 355 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 OR2L13Q8N349 312 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 OR52R1Q8NGF1 315 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 CTHRC1Q96CG8 243 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 SENP5Q96HI0 755 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 CDRT15Q96T59 188 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 CPPED1Q9BRF8 314 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-230ENST00000641927 IKZF5Q9H5V7 419 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 IL17BQ9UHF5 180 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 HS3ST3B1Q9Y662 390 aa16.3■□□□□ 0.2
PHGDH-230ENST00000641927 A0A087WV62 115 aa16.29■□□□□ 0.2
PHGDH-230ENST00000641927 PLOD3O60568 738 aa16.29■□□□□ 0.2
PHGDH-230ENST00000641927 NME6O75414 186 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-230ENST00000641927 LIFP15018 202 aa16.29■□□□□ 0.2
PHGDH-230ENST00000641927 PPIBP23284 216 aaKnown RBP16.29■□□□□ 0.2
PHGDH-230ENST00000641927 SOX18P35713 384 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms