RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ITGA3P26006 1051 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 PPP2R1BP30154 601 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 NTSP30990 170 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 PTGER4P35408 488 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 CPA2P48052 419 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 WNT3P56703 355 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 ID2Q02363 134 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 FOLH1Q04609 750 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 OCA2Q04671 838 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 SLC13A2Q13183 592 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 MPEG1Q2M385 716 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 MINDY4Q4G0A6 757 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 VWA2Q5GFL6 755 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 MFSD4BQ5TF39 518 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 ANXA8L1Q5VT79 327 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 SLC6A19Q695T7 634 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 LCN10Q6JVE6 187 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 FAM180BQ6P0A1 224 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 SLC2A7Q6PXP3 512 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 FAM198BQ6UWH4 519 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 MSANTD1Q6ZTZ1 278 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 ANKRD46Q86W74 232 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 OR4N5Q8IXE1 308 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 ZNF595Q8IYB9 648 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 PRSS58Q8IYP2 241 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 Q8NA96 180 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 DNAJB14Q8TBM8 379 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 TSPEARQ8WU66 669 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 CT55Q8WUE5 264 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 TANKQ92844 425 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 FKBP10Q96AY3 582 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 RCN3Q96D15 328 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 COQ8BQ96D53 544 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 SNRNP40Q96DI7 357 aaKnown RBP8.79□□□□□ -1
PHGDH-228ENST00000641847 OR52E6Q96RD3 313 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 CHST8Q9H2A9 424 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 RMND5AQ9H871 391 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 SLC52A3Q9NQ40 469 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 SLC35C2Q9NQQ7 365 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 PRDM9Q9NQV7 894 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 PRTFDC1Q9NRG1 225 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 AGPAT4Q9NRZ5 378 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 LANCL2Q9NS86 450 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 GIMAP4Q9NUV9 329 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 C14orf105Q9NVL8 296 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 FAM120CQ9NX05 1096 aaKnown RBP8.79□□□□□ -1
PHGDH-228ENST00000641847 GPR83Q9NYM4 423 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 GPN3Q9UHW5 284 aaPredicted RBP8.79□□□□□ -1
PHGDH-228ENST00000641847 NDUFAF1Q9Y375 327 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 ZNF780BQ9Y6R6 833 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 SHANK1Q9Y566 2161 aa8.79□□□□□ -1
PHGDH-228ENST00000641847 IGLV3-12A0A075B6K2 115 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 A0A1W2PS29 197 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 RNASET2O00584 256 aaKnown RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 FBP2O00757 339 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 CLDN4O14493 209 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 MRASO14807 208 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 LRRTM2O43300 516 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 BMP10O95393 424 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 GPR75O95800 540 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 ALPPP05187 535 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 C8orf89P0DMQ9 161 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 ESRRAP11474 423 aaPredicted RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 EFNA1P20827 205 aaPredicted RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 MAOAP21397 527 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 CALB2P22676 271 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 PTPN4P29074 926 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 FEN1P39748 380 aaKnown RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 NUDT2P50583 147 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 NCBP2P52298 156 aaKnown RBP eCLIP8.78□□□□□ -1
PHGDH-228ENST00000641847 PHC1P78364 1004 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 PLIN5Q00G26 463 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 DUSP2Q05923 314 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 STX4Q12846 297 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 CHAF1BQ13112 559 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 STX5Q13190 355 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 NCF4Q15080 339 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 TLR1Q15399 786 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 MAPKAPK3Q16644 382 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 ZNF750Q32MQ0 723 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 MMEL1Q495T6 779 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 COQ5Q5HYK3 327 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 C6orf10Q5SRN2 563 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 MLIPQ5VWP3 458 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 CPZQ66K79 652 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 MRPL14Q6P1L8 145 aaKnown RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 FAM199XQ6PEV8 388 aaPredicted RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 DNAJC14Q6Y2X3 702 aaPredicted RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 QSOX2Q6ZRP7 698 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 SHISA6Q6ZSJ9 500 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 CCDC121Q6ZUS5 278 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 MED25Q71SY5 747 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 OVCH1Q7RTY7 1134 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 RETREG3Q86VR2 466 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 SCUBE1Q8IWY4 988 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 CLECL1Q8IZS7 167 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 CISD2Q8N5K1 135 aaKnown RBP8.78□□□□□ -1
PHGDH-228ENST00000641847 NATD1Q8N6N6 113 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 OR4K14Q8NGD5 310 aa8.78□□□□□ -1
PHGDH-228ENST00000641847 STT3BQ8TCJ2 826 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms