RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 MAT1AQ00266 395 aaKnown RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 ID2Q02363 134 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 FOLH1Q04609 750 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 TP53BP2Q13625 1128 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 VEZF1Q14119 521 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 CLPPQ16740 277 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 TBCELQ5QJ74 424 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 TLDC1Q6P9B6 456 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 TMEM107Q6UX40 140 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 LRRC74BQ6ZQY2 392 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 ARHGAP22Q7Z5H3 698 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 GPR135Q8IZ08 494 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 C11orf65Q8NCR3 313 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 FAM110BQ8TC76 370 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 ADAMTS18Q8TE60 1221 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 MOAP1Q96BY2 351 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 MMABQ96EY8 250 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 MAGED4Q96JG8 741 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 SLC35G5Q96KT7 338 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 CCDC74BQ96LY2 380 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 PKP2Q99959 881 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 FANCEQ9HB96 536 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 ZCCHC3Q9NUD5 404 aaKnown RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 ARMC1Q9NVT9 282 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 C6orf203Q9P0P8 240 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 SERTAD3Q9UJW9 196 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 V9GYQ6 96 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 SCN3AQ9NY46 2000 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 H0YIG0 161 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 ZNF749O43361 778 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 EMC8O43402 210 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 LDB3O75112 727 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 SERPINA1P01009 418 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 FHP07954 510 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 CDK4P11802 303 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 BMP2P12643 396 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 PORP16435 677 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 CKMT2P17540 419 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 VHLP40337 213 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 GCGRP47871 477 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 DSTNP60981 165 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 RPS26P62854 115 aaKnown RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 ACY1Q03154 408 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 RBBP4Q09028 425 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 LTB4RQ15722 352 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 SYT16Q17RD7 645 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 YOD1Q5VVQ6 348 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 TTLL10Q6ZVT0 673 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 SZRD1Q7Z422 152 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 LILRA2Q8N149 483 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 OR56A1Q8NGH5 318 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 SNIP1Q8TAD8 396 aaKnown RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 FBXO30Q8TB52 745 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 KAT2AQ92830 837 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 MAL2Q969L2 176 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 ANKRD9Q96BM1 317 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 TBC1D20Q96BZ9 403 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 ZNF501Q96CX3 271 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 ELP4Q96EB1 424 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 PEX11GQ96HA9 241 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 GFM1Q96RP9 751 aaKnown RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 NDC1Q9BTX1 674 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 RBCK1Q9BYM8 510 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 TMEM38AQ9H6F2 299 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 FGF21Q9NSA1 209 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 DCAF13Q9NV06 445 aaKnown RBP12.29□□□□□ -0.44
PHGDH-221ENST00000641573 OLAHQ9NV23 265 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 NDOR1Q9UHB4 597 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 RIMS3Q9UJD0 308 aa12.29□□□□□ -0.44
PHGDH-221ENST00000641573 MYOCOSA0A1B0GUC4 107 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 BLACEA4D250 179 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 NTN3O00634 580 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 HNRNPRO43390 633 aaKnown RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 TIPRLO75663 272 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ARAFP10398 606 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ALAS2P22557 587 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 PPP2R1BP30154 601 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 KDELR2P33947 212 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 MC3RP41968 323 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 PRKAG1P54619 331 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ARSFP54793 590 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 PRR5P85299 388 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 EEF1A2Q05639 463 aaKnown RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 SCARB2Q14108 478 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ZNF630Q2M218 657 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 LRRC23Q53EV4 343 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 PRAMEF17Q5VTA0 474 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 TNFAIP8L2Q6P589 184 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 BHLHB9Q6PI77 547 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ENPP6Q6UWR7 440 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 CEACAM20Q6UY09 585 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 LURAP1LQ8IV03 231 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ZC3H7AQ8IWR0 971 aaKnown RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ZNF595Q8IYB9 648 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 EID3Q8N140 333 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 PAPD5Q8NDF8 572 aaKnown RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 RCBTB1Q8NDN9 531 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ADCY4Q8NFM4 1077 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 OR51Q1Q8NH59 317 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms