RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TSPAN19P0C672 248 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 NR2F6P10588 404 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 DEFB103AP81534 67 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 EFNB1P98172 346 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF77Q15935 545 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 SYPL1Q16563 259 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 PLK5Q496M5 336 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 PDZK1Q5T2W1 519 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZER1Q7Z7L7 766 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 DCUN1D3Q8IWE4 304 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ANKRD53Q8N9V6 530 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 FGF11Q92914 225 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 DIRAS2Q96HU8 199 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ISYNA1Q9NPH2 558 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 MRPS18AQ9NVS2 196 aaKnown RBP19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 C5AR2Q9P296 337 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 SLC9A8Q9Y2E8 581 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 SPIN1Q9Y657 262 aaPredicted RBP19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ALX3O95076 343 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 CSF3P09919 207 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 PPP2R1BP30154 601 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 CDK5Q00535 292 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 MLC1Q15049 377 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 PDZD3Q86UT5 571 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 NUDT13Q86X67 352 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 RDH10Q8IZV5 341 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 VWA5B2Q8N398 1253 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR7G1Q8NGA0 311 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR5AR1Q8NGP9 310 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 AP3S1Q92572 193 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 TAC3Q9UHF0 121 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 PRRC2BQ5JSZ5 2229 aaKnown RBP19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 LINC00854A0A1B0GVQ3 168 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 TMEM129A0AVI4 362 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 M0R3H8 397 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 TFECO14948 347 aaPredicted RBP19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 TMCC2O75069 709 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 FGF18O76093 207 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR12D1P0DN82 309 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 ERGP11308 486 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 WEE1P30291 646 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 SMSP52788 366 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 SLAMF1Q13291 335 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 ARHGAP15Q53QZ3 475 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 C1orf94Q6P1W5 598 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 SLC7A6Q92536 515 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 SLC35G5Q96KT7 338 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 MMP28Q9H239 520 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 WASH6PQ9NQA3 447 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 WNT6Q9Y6F9 365 aa19.01■□□□□ 0.63
SYNGAP1-227ENST00000638142 PRAMEF27A3QJZ7 478 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 VEGFDO43915 354 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 FGF19O95750 216 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 PRNPP04156 253 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 CLEC2LP0C7M8 214 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 NR2F1P10589 423 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 EPHA5P54756 1037 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 DAB2P98082 770 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 DPTQ07507 201 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 RAB40BQ12829 278 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 ARHGAP19Q14CB8 494 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 DUSP6Q16828 381 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 ENTPD8Q5MY95 495 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 SLC35F1Q5T1Q4 408 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 ACSM5Q6NUN0 579 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 FAM83HQ6ZRV2 1179 aaPredicted RBP19■□□□□ 0.63
SYNGAP1-227ENST00000638142 TMEM203Q969S6 136 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 OTUB2Q96DC9 234 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 SPATA5L1Q9BVQ7 753 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR51I1Q9H343 314 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 FGF20Q9NP95 211 aaPredicted RBP19■□□□□ 0.63
SYNGAP1-227ENST00000638142 LHX9Q9NQ69 397 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 MAN2C1Q9NTJ4 1040 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 PAQR5Q9NXK6 330 aaPredicted RBP19■□□□□ 0.63
SYNGAP1-227ENST00000638142 MAU2Q9Y6X3 613 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 ABHD14A-ACY1A0A1B0GW23 586 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 SNTNA6NMZ2 147 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 TNFRSF10AO00220 468 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 NDUFB5O43674 189 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 MOSPD3O75425 235 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 EPHX1P07099 455 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 YES1P07947 543 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 ACP2P11117 423 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 PRKCAP17252 672 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 GSTM3P21266 225 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 GAS1P54826 345 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 TPBGQ13641 420 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 FLYWCH1Q4VC44 716 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 C11orf96Q7Z7L8 435 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 NOXA1Q86UR1 476 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 IQCHQ86VS3 1027 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 COMTD1Q86VU5 262 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 MORN4Q8NDC4 146 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 TTYH2Q9BSA4 534 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 C11orf54Q9H0W9 315 aaPredicted RBP19■□□□□ 0.63
SYNGAP1-227ENST00000638142 ADAM29Q9UKF5 820 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 FBXW2Q9UKT8 454 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 BOLA1Q9Y3E2 137 aa19■□□□□ 0.63
SYNGAP1-227ENST00000638142 FAM25AB3EWG3 89 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 FAM25CB3EWG5 89 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms