RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 IQCCQ4KMZ1 466 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 EIPR1Q53HC9 387 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ARMCX4Q5H9R4 360 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SPANXN4Q5MJ08 99 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC25A30Q5SVS4 291 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 AGAP7PQ5VUJ5 663 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 LYPLAL1Q5VWZ2 237 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TCEAL6Q6IPX3 200 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 BTNL8Q6UX41 500 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM64Q6YI46 380 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 Q6ZVH6 145 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 COPS6Q7L5N1 327 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 COX8CQ7Z4L0 72 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TMCO2Q7Z6W1 182 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ABI3BPQ7Z7G0 1075 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 HOOK3Q86VS8 718 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 KCNMB4Q86W47 210 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MEX3DQ86XN8 651 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TBC1D10CQ8IV04 446 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TUSC5Q8IXB3 177 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ZC3H3Q8IXZ2 948 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TIGD4Q8IY51 512 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC22A15Q8IZD6 547 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MAML2Q8IZL2 1156 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF444Q8N0Y2 327 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 THEM5Q8N1Q8 247 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC39A11Q8N1S5 342 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC43A2Q8N370 569 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 Q8N377 158 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 NME8Q8N427 588 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TEX26Q8N6G2 289 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 RTL3Q8N8U3 475 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 BANPQ8N9N5 519 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 UXS1Q8NBZ7 420 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 OR5M9Q8NGP3 310 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 NCOA7Q8NI08 942 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ZPLD1Q8TCW7 415 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 GPR148Q8TDV2 347 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PCNPQ8WW12 178 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SMPDL3AQ92484 453 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SEPT8Q92599 483 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 RAD54LQ92698 747 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 RIT1Q92963 219 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 P2RX5Q93086 422 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ATP6V1E2Q96A05 226 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 BPIFA2Q96DR5 249 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SGF29Q96ES7 293 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 RBM18Q96H35 190 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SERAC1Q96JX3 654 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ZMAT2Q96NC0 199 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 FOXN4Q96NZ1 517 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TSSK2Q96PF2 358 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 PAPOLGQ9BWT3 736 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TRIM6Q9C030 488 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 DNAI2Q9GZS0 605 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TDRD3Q9H7E2 651 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MOB1AQ9H8S9 216 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 JPT2Q9H910 190 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ELL3Q9HB65 397 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MYOZ2Q9NPC6 264 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 IL1RAPQ9NPH3 570 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM212BQ9NTI7 297 aaPredicted RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CUTCQ9NTM9 273 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM161AQ9NX61 479 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SEPT10Q9P0V9 454 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CTSZQ9UBR2 303 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 NOCTQ9UK39 431 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF346Q9UL40 294 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 HBS1LQ9Y450 684 aaKnown RBP0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CACNA1BQ00975 2339 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SDK1Q7Z5N4 2213 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 HEATR5AQ86XA9 2040 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 SPTBN2O15020 2390 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 NEDD4P46934 1319 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 CDHR2Q9BYE9 1310 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 RP1P56715 2156 aa0.89□□□□□ -2.27
SMARCB1-209ENST00000635578 MDC1Q14676 2089 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD12Q6UB98 2062 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ABCA7Q8IZY2 2146 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 SPTBN4Q9H254 2564 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 TTC28Q96AY4 2481 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A0U1RQG5 324 aaPredicted RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 TEX48A0A1B0GUV7 120 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 LOC390937A0A1W2PQ73 354 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 EPOPA6NHQ4 379 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 NKX6-3A6NJ46 265 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 RPL37AP8A6NKH3 93 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 A8MU76 341 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ARHGEF33A8MVX0 844 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 C2CD4DB7Z1M9 353 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 G3V2L1 256 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 TRAFD1O14545 582 aaPredicted RBP0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 HAT1O14929 419 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 TNFSF12O43508 249 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 SCO2O43819 266 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 GPRIN2O60269 458 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 ACSL4O60488 711 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 SELENOFO60613 162 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 SNAP91O60641 907 aa0.88□□□□□ -2.27
SMARCB1-209ENST00000635578 DUSP11O75319 330 aaKnown RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms