RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CLDN2P57739 230 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 NLRP11P59045 1033 aaKnown RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 UBE2G2P60604 165 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ACTBP60709 375 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 RAB4BP61018 213 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ACTA2P62736 377 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ACTG1P63261 375 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ACTG2P63267 376 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ACTC1P68032 377 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ACTA1P68133 377 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SIRPAP78324 504 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 IRX4P78413 519 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 BDH1Q02338 343 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 FOLH1Q04609 750 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ZNF91Q05481 1191 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SIGLEC14Q08ET2 396 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 IFFO1Q0D2I5 559 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CDH17Q12864 832 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TSPAN31Q12999 210 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 RNPS1Q15287 305 aaKnown RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TGFBIQ15582 683 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 UAP1Q16222 522 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TATDN3Q17R31 274 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 GOLGA7BQ2TAP0 167 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 C18orf21Q32NC0 220 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 EDRF1Q3B7T1 1238 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 POM121L1PQ3SYA9 428 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 FAM174BQ3ZCQ3 159 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CDONQ4KMG0 1287 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 LBHQ53QV2 105 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 DCAF6Q58WW2 860 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 COQ5Q5HYK3 327 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CTSL3PQ5NE16 218 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 C6orf10Q5SRN2 563 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 C20orf194Q5TEA3 1177 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 FAM109BQ6ICB4 259 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 PYHIN1Q6K0P9 492 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ZSCAN25Q6NSZ9 544 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 LRRC8BQ6P9F7 803 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TEX38Q6PEX7 206 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CBLN3Q6UW01 205 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 FAM159AQ6UWV7 190 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SLC35D2Q76EJ3 337 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ABHD12BQ7Z5M8 362 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SNX20Q7Z614 316 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 LDB1Q86U70 411 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TSPAN33Q86UF1 283 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TAC4Q86UU9 113 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SLC13A5Q86YT5 568 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 VSTM4Q8IW00 320 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 MB21D2Q8IYB1 491 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 OR2L3Q8NG85 312 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 OR4A15Q8NGL6 344 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 OR5M1Q8NGP8 315 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 OR13C3Q8NGS6 347 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 C16orf52Q8NHV5 167 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TBC1D16Q8TBP0 767 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ADAMTS16Q8TE57 1224 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CD101Q93033 1021 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ADIPOR1Q96A54 375 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 NXNL1Q96CM4 212 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 PPP1R36Q96LQ0 422 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 DUX5Q96PT3 197 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 RAB40CQ96S21 281 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CCNL2Q96S94 520 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CCT8L2Q96SF2 557 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 MTERF1Q99551 399 aaKnown RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TMEM246Q9BRR3 403 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ATG101Q9BSB4 218 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TUBGCP2Q9BSJ2 902 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 DGCR6LQ9BY27 220 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 NUF2Q9BZD4 464 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 PPIL3Q9H2H8 161 aaKnown RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 FN3KQ9H479 309 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 KLHL31Q9H511 634 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SMYD3Q9H7B4 428 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 TRIM45Q9H8W5 580 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 KIF9Q9HAQ2 790 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 FOLH1BQ9HBA9 442 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 C12orf4Q9NQ89 552 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ZNF701Q9NV72 531 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ELOVL5Q9NYP7 299 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 MSRB1Q9NZV6 116 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 NDUFA13Q9P0J0 144 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CTNNAL1Q9UBT7 734 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 PLEKHB1Q9UF11 243 aaPredicted RBP2.74□□□□□ -1.97
PSPC1-208ENST00000635562 NARFQ9UHQ1 456 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 LNPEPQ9UIQ6 1025 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SIX4Q9UIU6 781 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 HACL1Q9UJ83 578 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 ZNF580Q9UK33 172 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 MYO6Q9UM54 1294 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 SCML1Q9UN30 329 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 KCNJ14Q9UNX9 436 aa2.74□□□□□ -1.97
PSPC1-208ENST00000635562 CCDC171Q6TFL3 1326 aa2.73□□□□□ -1.97
PSPC1-208ENST00000635562 A0A096LPK6 155 aa2.73□□□□□ -1.97
PSPC1-208ENST00000635562 A0A0U1RQF3 1178 aa2.73□□□□□ -1.97
PSPC1-208ENST00000635562 FAM237AA0A1B0GTK4 181 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms