RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 MAGEA2P43356 314 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 C1orf220Q5T0J3 134 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 MEDAGQ5VYS4 303 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 PM20D1Q6GTS8 502 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 MAMDC2Q7Z304 686 aaPredicted RBP13.47□□□□□ -0.25
UBE3A-220ENST00000630424 NUFIP1Q9UHK0 495 aaKnown RBP13.47□□□□□ -0.25
UBE3A-220ENST00000630424 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
UBE3A-220ENST00000630424 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
UBE3A-220ENST00000630424 DNAJC13O75165 2243 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 KIR2DS5A0A0G2JLQ3 304 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 A0A0G2JNG1 304 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 A0A1W2PPK0 400 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 TMX2-CTNND1H3BSU7 103 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 KIR2DS3K7RE56 304 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 SLC6A11P48066 632 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 MAN2A2P49641 1150 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 WNT7BP56706 349 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 KIR2DS5Q14953 304 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 EID2Q8N6I1 236 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 TSPEARQ8WU66 669 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 LRIT1Q9P2V4 623 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 SCP2D1Q9UJQ7 156 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 EXOSC1Q9Y3B2 195 aaKnown RBP13.47□□□□□ -0.25
UBE3A-220ENST00000630424 SIT1Q9Y3P8 196 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 FDXRP22570 491 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 THBS2P35442 1172 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 DPP6P42658 865 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 HK3P52790 923 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 PRR22Q8IZ63 422 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 C3orf58Q8NDZ4 430 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 ATOH1Q92858 354 aaPredicted RBP13.47□□□□□ -0.25
UBE3A-220ENST00000630424 PIP5K1AQ99755 562 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 STARD5Q9NSY2 213 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 FKBP14Q9NWM8 211 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 IL17CQ9P0M4 197 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 DHDHQ9UQ10 334 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 VDAC3Q9Y277 283 aa13.47□□□□□ -0.25
UBE3A-220ENST00000630424 RBMX2Q9Y388 322 aaKnown RBP13.47□□□□□ -0.25
UBE3A-220ENST00000630424 CD3GP09693 182 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 XCR1P46094 333 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 RPL13AP3Q6NVV1 102 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 PARS2Q7L3T8 475 aaKnown RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 OR9K2Q8NGE7 335 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 OR8J3Q8NGG0 315 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 THAP6Q8TBB0 222 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 AIFM2Q9BRQ8 373 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 EHD1Q9H4M9 534 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 SLC39A1Q9NY26 324 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 PCDHGB6Q9Y5F9 930 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 C17orf105B2RV13 164 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 BCAT2O15382 392 aaPredicted RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 PABPC4LP0CB38 370 aaKnown RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 GJA4P35212 333 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 PRKXP51817 358 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 OR4D1Q15615 310 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 MANEALQ5VSG8 457 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 GTF2IRD2BQ6EKJ0 949 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 LIPIQ6XZB0 460 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 GTF2IRD2Q86UP8 949 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 LHFPL3Q86UP9 236 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 PNPLA1Q8N8W4 532 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 OR6C4Q8NGE1 309 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 HINT2Q9BX68 163 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 CWH43Q9H720 699 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 GJE1A6NN92 205 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 ACTL6BO94805 426 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 ETFAP13804 333 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 GPR4P46093 362 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 CSNK1EP49674 416 aaKnown RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 CLCA4Q14CN2 919 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 SF3B4Q15427 424 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■■□□ 15.4
UBE3A-220ENST00000630424 C18orf21Q32NC0 220 aaPredicted RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 ENPP6Q6UWR7 440 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 TEX26Q8N6G2 289 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 WACQ9BTA9 647 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
UBE3A-220ENST00000630424 ZNF442Q9H7R0 627 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 GPRC5BQ9NZH0 403 aa13.46□□□□□ -0.25
UBE3A-220ENST00000630424 CITO14578 2027 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 F5P12259 2224 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 FXYD6-FXYD2A0A087WZ82 144 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.46□□□□□ -0.26
UBE3A-220ENST00000630424 BRINP1O60477 761 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 ATP4BP51164 291 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 EXOC3L2Q2M3D2 409 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 RANBP10Q6VN20 620 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.26
UBE3A-220ENST00000630424 CLECL1Q8IZS7 167 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 PSD4Q8NDX1 1056 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 ELP5Q8TE02 316 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 SLC12A9Q9BXP2 914 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 FXYD6Q9H0Q3 95 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 RDH14Q9HBH5 336 aa13.46□□□□□ -0.26
UBE3A-220ENST00000630424 ZNF224Q9NZL3 707 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms