RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 MED27Q6P2C8 311 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 YRDCQ86U90 279 aaKnown RBP18.34■□□□□ 0.53
TARDBP-228ENST00000629725 LAS2Q8IYD9 372 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 PDIK1LQ8N165 341 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 SPATA6LQ8N4H0 392 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 OR1J4Q8NGS1 313 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 OR51B5Q9H339 312 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 ACBD3Q9H3P7 528 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 UBTD1Q9HAC8 227 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 PGRMC1O00264 195 aaKnown RBP18.33■□□□□ 0.52
TARDBP-228ENST00000629725 SSTR4P31391 388 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 RAP1GDS1P52306 607 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 HNRNPH2P55795 449 aaKnown RBP18.33■□□□□ 0.52
TARDBP-228ENST00000629725 GAB1Q13480 694 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 E2F2Q14209 437 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 FRG1Q14331 258 aaKnown RBP18.33■□□□□ 0.52
TARDBP-228ENST00000629725 SETDB1Q15047 1291 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 DEPDC1Q5TB30 811 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 GCNT2Q8N0V5 402 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 RGMAQ96B86 450 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 CD274Q9NZQ7 290 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 PTBP2Q9UKA9 531 aaKnown RBP18.33■□□□□ 0.52
TARDBP-228ENST00000629725 TEX264Q9Y6I9 313 aa18.33■□□□□ 0.52
TARDBP-228ENST00000629725 CHD3Q12873 2000 aaKnown RBP18.33■□□□□ 0.52
TARDBP-228ENST00000629725 HEATR5AQ86XA9 2040 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 WASHC1A8K0Z3 465 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 H0Y3Z8 333 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 SIAH2O43255 324 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 CTIFO43310 598 aaKnown RBP18.32■□□□□ 0.52
TARDBP-228ENST00000629725 CDH16O75309 829 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 SERPINB1P30740 379 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 GALNSP34059 522 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 MC3RP41968 323 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 SLC12A2P55011 1212 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 EEF1A1P68104 462 aaKnown RBP18.32■□□□□ 0.52
TARDBP-228ENST00000629725 SRYQ05066 204 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 MGAT5Q09328 741 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 EEF1A1P5Q5VTE0 462 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 PLXDC2Q6UX71 529 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 ADGRE4PQ86SQ3 457 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 ZCCHC7Q8N3Z6 543 aaKnown RBP18.32■□□□□ 0.52
TARDBP-228ENST00000629725 PDPRQ8NCN5 879 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 OR7G3Q8NG95 312 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 WNT2BQ93097 391 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 UCN2Q96RP3 112 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 CENPKQ9BS16 269 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 ZNF226Q9NYT6 803 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 PACSIN3Q9UKS6 424 aa18.32■□□□□ 0.52
TARDBP-228ENST00000629725 GOLGA6L10A0A0M3HER8 536 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 GLOD5A6NK44 160 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 DEFB108AA8MXU0 73 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 PLPP1O14494 284 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 CNOT4O95628 575 aaKnown RBP18.31■□□□□ 0.52
TARDBP-228ENST00000629725 CCDC166P0CW27 439 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 CBLBQ13191 982 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 OR4D1Q15615 310 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 SCIMPQ6UWF3 145 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 ENPP6Q6UWR7 440 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 ANGPTL8Q6UXH0 198 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 PRR22Q8IZ63 422 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 RNF175Q8N4F7 328 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 LRRC39Q96DD0 335 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 PIK3IP1Q96FE7 263 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 WFIKKN1Q96NZ8 548 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 CD244Q9BZW8 370 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 RHOJQ9H4E5 214 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 METTL7AQ9H8H3 244 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 KLHL28Q9NXS3 571 aa18.31■□□□□ 0.52
TARDBP-228ENST00000629725 RAI1Q7Z5J4 1906 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-228ENST00000629725 WISP3O95389 354 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-228ENST00000629725 S100BP04271 92 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-228ENST00000629725 SLC35E2BP0CK96 405 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 SLC35E2P0CK97 266 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 KRT15P19012 456 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 ABCD3P28288 659 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 RPS13P62277 151 aaKnown RBP18.3■□□□□ 0.52
TARDBP-228ENST00000629725 FAM27E3Q08E93 113 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 DDX39BQ13838 428 aaKnown RBP18.3■□□□□ 0.52
TARDBP-228ENST00000629725 C20orf204Q6ZNR8 217 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 LRRC70Q7Z2Q7 622 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 PPP1R14CQ8TAE6 165 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 ADIPOR1Q96A54 375 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 CXorf21Q9HAI6 301 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 CLCF1Q9UBD9 225 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 ADGRE2Q9UHX3 823 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 JRKLQ9Y4A0 524 aa18.3■□□□□ 0.52
TARDBP-228ENST00000629725 ANK3Q12955 4377 aaKnown RBP18.3■□□□□ 0.52
TARDBP-228ENST00000629725 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 MSTNO14793 375 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 SNPHO15079 494 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 TNFSF13O75888 250 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 ABCB1P08183 1280 aaPredicted RBP18.29■□□□□ 0.52
TARDBP-228ENST00000629725 NR2F6P10588 404 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 CD1DP15813 335 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 CHMP24386 653 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 POU4F1Q01851 419 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 KBTBD12Q3ZCT8 623 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 ANKMY2Q8IV38 441 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 TRIM42Q8IWZ5 723 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 GALNT12Q8IXK2 581 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms