RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PLXDC1Q8IUK5 500 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ALDH16A1Q8IZ83 802 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ZDHHC1Q8WTX9 485 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 NANSQ9NR45 359 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 A6NCN8 305 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 CD68P34810 354 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 FRKP42685 505 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 GALK2Q01415 458 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 SIX1Q15475 284 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 C3orf33Q6P1S2 294 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ARHGAP11AQ6P4F7 1023 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 TMPRSS12Q86WS5 348 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF440Q8IYI8 595 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 DENND6BQ8NEG7 585 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 OR5J2Q8NH18 312 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 CREB3L1Q96BA8 519 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ECHDC3Q96DC8 303 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM19Q96HH6 336 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF559Q9BR84 538 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 HERPUD2Q9BSE4 406 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM121BQ9BXQ6 578 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 TRBV2A0A0J9YWF9 115 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-209ENST00000627620 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-209ENST00000627620 STSP08842 583 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 LAMP1P11279 417 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 GGT1P19440 569 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 GNRHRP30968 328 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 PIGGQ5H8A4 983 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 C22orf42Q6IC83 251 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 KLBQ86Z14 1044 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 MGLLQ99685 303 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-209ENST00000627620 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.46
SCN8A-209ENST00000627620 ABCG2Q9UNQ0 655 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 ISPDA4D126 451 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 SLC16A8O95907 504 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 THEGLP0DJG4 465 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 CLCN2P51788 898 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 HSD11B2P80365 405 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 RANBP10Q6VN20 620 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 TIGD4Q8IY51 512 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 TOR1AIP2Q8NFQ8 470 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 ADAMTS18Q8TE60 1221 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 IGSF5Q9NSI5 407 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 FAM118AQ9NWS6 357 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 HSPB11Q9Y547 144 aa12.21□□□□□ -0.46
SCN8A-209ENST00000627620 CD8B2A6NJW9 211 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 VSTM2BA6NLU5 285 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 KCNJ13O60928 360 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 CD8BP10966 210 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 HTR6P50406 440 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 CTBP2P56545 445 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 GRM7Q14831 915 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 NSDHLQ15738 373 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF852Q6ZMS4 543 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF551Q7Z340 670 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-209ENST00000627620 COMMD6Q7Z4G1 85 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF100Q8IYN0 542 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ZSCAN1Q8NBB4 408 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 PGAP3Q96FM1 320 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-209ENST00000627620 NEDD4LQ96PU5 975 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 PAK1IP1Q9NWT1 392 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-209ENST00000627620 KNDC1Q76NI1 1749 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ACTA2P62736 377 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ACTG2P63267 376 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 CLDN10P78369 228 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 CDKL4Q5MAI5 379 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 CENPSQ8N2Z9 138 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 CNN2Q99439 309 aaKnown RBP12.2□□□□□ -0.46
SCN8A-209ENST00000627620 PHOX2BQ99453 314 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 SPO11Q9Y5K1 396 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 SDC3O75056 442 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 UGT2B10P36537 528 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 RABIFP47224 123 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 SPHARQ15513 63 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ARSKQ6UWY0 536 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF761Q86XN6 746 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-209ENST00000627620 LAS2Q8IYD9 372 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 TEX26Q8N6G2 289 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 OR52N2Q8NGI0 321 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 APIPQ96GX9 242 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 SLC6A7Q99884 636 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 LINC00597Q9H2U6 94 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 KCNIP3Q9Y2W7 256 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 MYH2Q9UKX2 1941 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 COQ5Q5HYK3 327 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 NDUFAF5Q5TEU4 345 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 ZC3H14Q6PJT7 736 aaKnown RBP12.2□□□□□ -0.46
SCN8A-209ENST00000627620 VTCN1Q7Z7D3 282 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 NALCNQ8IZF0 1738 aa12.2□□□□□ -0.46
SCN8A-209ENST00000627620 A0A0G2JPF8 293 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 HNRNPCL3B7ZW38 293 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 E2F3O00716 465 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 CD3GP09693 182 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 HNRNPCL4P0DMR1 293 aa12.19□□□□□ -0.46
SCN8A-209ENST00000627620 ZNF35P13682 527 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms