RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 SF3A2Q15428 464 aaKnown RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 TRIP10Q15642 601 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 LTB4RQ15722 352 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 LRRC23Q53EV4 343 aaPredicted RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ZNF628Q5EBL2 1059 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ATAD3BQ5T9A4 648 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 RHBDD2Q6NTF9 364 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 REEP3Q6NUK4 255 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 TNFAIP8L2Q6P589 184 aaPredicted RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ZCCHC12Q6PEW1 402 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 CBLL1Q75N03 491 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 CCDC80Q76M96 950 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 EIF3MQ7L2H7 374 aaKnown RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 PATL1Q86TB9 770 aaKnown RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 NAXDQ8IW45 347 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ZC3H7AQ8IWR0 971 aaKnown RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 OR4N5Q8IXE1 308 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ST13P4Q8IZP2 240 aaPredicted RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 LGI4Q8N135 537 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 OR2L13Q8N349 312 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 HORMAD2Q8N7B1 307 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 AGBL5Q8NDL9 886 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 TMEM52Q8NDY8 209 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 OR51Q1Q8NH59 317 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 NFKBIDQ8NI38 313 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 FBXO30Q8TB52 745 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 KAT2AQ92830 837 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 MAL2Q969L2 176 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 SLC47A1Q96FL8 570 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 RBM18Q96H35 190 aaKnown RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 PYURFQ96I23 114 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 MAGED4Q96JG8 741 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ZNF578Q96N58 590 aaPredicted RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 DGAT2Q96PD7 388 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 MS4A4EQ96PG1 132 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 OR6C1Q96RD1 312 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ZNF607Q96SK3 696 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 PKP2Q99959 881 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 EDEM2Q9BV94 578 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 CHID1Q9BWS9 393 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ACTRT3Q9BYD9 372 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 ASPSCR1Q9BZE9 553 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 VCXQ9H320 206 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 OR51I1Q9H343 314 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 SIDT1Q9NXL6 827 aaKnown RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 AKAP7Q9P0M2 348 aaPredicted RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 TRPC4Q9UBN4 977 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 RIMS3Q9UJD0 308 aa7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 C19orf53Q9UNZ5 99 aaPredicted RBP7.07□□□□□ -1.28
PTP4A1-206ENST00000627002 EFCAB7A8K855 629 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 TMX2-CTNND1H3BSU7 103 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 UPK1AO00322 258 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 CASC3O15234 703 aaKnown RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 SUV39H1O43463 412 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 SLC28A2O43868 658 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 FOXD2O60548 495 aaPredicted RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 COQ9O75208 318 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 DEAF1O75398 565 aaPredicted RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 TIPRLO75663 272 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 SCRG1O75711 98 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 PRKD3O94806 890 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 ZNF682O95780 498 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 HMGN2P05204 90 aaKnown RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 BCHEP06276 602 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 TFPTP0C1Z6 253 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 OR12D1P0DN82 309 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 NR2F1P10589 423 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 FGF5P12034 268 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 CD59P13987 128 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 STT3AP46977 705 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 CLCN2P51788 898 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 CASP9P55211 416 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 PCBP3P57721 371 aaKnown RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 RPS26P62854 115 aaKnown RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 E2F1Q01094 437 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 ID2Q02363 134 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 MAP4K2Q12851 820 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 LASP1Q14847 261 aaKnown RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 MYBPC3Q14896 1274 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 C16orf72Q14CZ0 275 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 ATP6AP1Q15904 470 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 CSRP2Q16527 193 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 SYT16Q17RD7 645 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 PRICKLE4Q2TBC4 344 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 CRB2Q5IJ48 1285 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 OGFRL1Q5TC84 451 aaPredicted RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 FHL5Q5TD97 284 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 ARHGAP40Q5TG30 622 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 PRAMEF8Q5VWM4 474 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 PRAMEF7Q5VXH5 474 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 CDC73Q6P1J9 531 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 ENPP6Q6UWR7 440 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 RNF111Q6ZNA4 994 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 RBM44Q6ZP01 1051 aaKnown RBP7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 QSOX2Q6ZRP7 698 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 PPP1R3BQ86XI6 285 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 KRT73Q86Y46 540 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 GALNT12Q8IXK2 581 aa7.06□□□□□ -1.28
PTP4A1-206ENST00000627002 LILRA2Q8N149 483 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms