RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 NME2P22392 152 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 FEN1P39748 380 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 BST1Q10588 318 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 EBPQ15125 230 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 RFTN2Q52LD8 501 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 PIGGQ5H8A4 983 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 TICAM1Q8IUC6 712 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 CISD2Q8N5K1 135 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF781Q8N8C0 355 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 FNDC5Q8NAU1 212 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 OR2T11Q8NH01 316 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 FAR1Q8WVX9 515 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 EXOSC8Q96B26 276 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 PPCDCQ96CD2 204 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 ZBED6CLQ96FA7 236 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 GAL3ST4Q96RP7 486 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 OLAHQ9NV23 265 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 ASIC5Q9NY37 505 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 MAT2BQ9NZL9 334 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 LUZP4Q9P127 313 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 CROCCQ5TZA2 2017 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 MYOCOSA0A1B0GUC4 107 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 TTC36A6NLP5 189 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 MYO1GB0I1T2 1018 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 TCP11X1B4DZS4 312 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 WWP2O00308 870 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 PLOD3O60568 738 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 PEX11AO75192 247 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 SKAP2O75563 359 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 BCKDHAP12694 445 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 NAGAP17050 411 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 PRPS1L1P21108 318 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 ARRB2P32121 409 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 KCNC4Q03721 635 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 EMX2Q04743 252 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 MAPKAPK3Q16644 382 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 TBCELQ5QJ74 424 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 C6orf136Q5SQH8 315 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 BNC2Q6ZN30 1099 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 RGS9BPQ6ZS82 235 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 GK5Q6ZS86 529 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 C9orf40Q8IXQ3 194 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF615Q8N8J6 731 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 MGARPQ8TDB4 240 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 GRHL3Q8TE85 626 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 HSPBAP1Q96EW2 488 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 SIGLEC12Q96PQ1 595 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 SECISBP2Q96T21 854 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 ASF1BQ9NVP2 202 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 TAS2R9Q9NYW1 312 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 CNIH4Q9P003 139 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF639Q9UID6 485 aa12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 HELZ2Q9BYK8 2649 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-216ENST00000626000 ASPDHA6ND91 283 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 TMEM200CA6NKL6 621 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 PLOD2O00469 737 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 TP53I11O14683 189 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 HDAC3O15379 428 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 PDPK1O15530 556 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 ITM2AO43736 263 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 SNNO75324 88 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 F10P00742 488 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 SSTR4P31391 388 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 NCBP2P52298 156 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■□□□□ 10.4
SNRPA1-216ENST00000626000 C21orf58P58505 322 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 PDE7AQ13946 482 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 KRTCAP3Q53RY4 240 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF628Q5EBL2 1059 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 SPINK14Q6IE38 97 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 DGAT2L6Q6ZPD8 337 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF321PQ8N8H1 164 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 ST6GALNAC3Q8NDV1 305 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 PSD4Q8NDX1 1056 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 DYDC1Q8WWB3 177 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 NR4A3Q92570 626 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 SPACA9Q96E40 222 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 DTNBP1Q96EV8 351 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 SORT1Q99523 831 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 SLX1AQ9BQ83 275 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 TRIM4Q9C037 500 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 ANKRD10Q9NXR5 420 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 BCAP29Q9UHQ4 241 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 PTGDR2Q9Y5Y4 395 aa12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 GCN1Q92616 2671 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-216ENST00000626000 ATP6AP2A0A1C7CYW4 349 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 ACOT7O00154 380 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 PRKNO60260 465 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 MAN1A2O60476 641 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 ATP6AP2O75787 350 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 SOX30O94993 753 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 P04436 131 aa12.95□□□□□ -0.34
SNRPA1-216ENST00000626000 FBXO45P0C2W1 286 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms