RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 SSR4P51571 173 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 SLC18A1P54219 525 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 PPP2R2AP63151 447 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 RAE1P78406 368 aaKnown RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 MAD2L1Q13257 205 aaPredicted RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 ZNF169Q14929 603 aaPredicted RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 TTMPQ5BVD1 217 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 NXNQ6DKJ4 435 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 FAM180BQ6P0A1 224 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 GALNT18Q6P9A2 607 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 FAM180AQ6UWF9 173 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 IKBIPQ70UQ0 350 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 TICAM1Q8IUC6 712 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 FAM9CQ8IZT9 166 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 FAM98AQ8NCA5 519 aaKnown RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 OR5L2Q8NGL0 311 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 OR2T11Q8NH01 316 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 CLHC1Q8NHS4 586 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 ZFP28Q8NHY6 868 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 RAB3IL1Q8TBN0 382 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 SLC22A8Q8TCC7 542 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 ASB15Q8WXK1 588 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 UCN3Q969E3 161 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 PNPLA2Q96AD5 504 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 TM4SF18Q96CE8 201 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 FBXL20Q96IG2 436 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 METTL2AQ96IZ6 378 aaKnown RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 C1orf50Q9BV19 199 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 NUF2Q9BZD4 464 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 TRIM4Q9C037 500 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 ZBTB20Q9HC78 741 aaPredicted RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 ZFP64Q9NPA5 681 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 MYNNQ9NPC7 610 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 INTS9Q9NV88 658 aaKnown RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 THAP1Q9NVV9 213 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 PLA2G3Q9NZ20 509 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 SH3BP4Q9P0V3 963 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 MARCOQ9UEW3 520 aaPredicted RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 EIF3LQ9Y262 564 aaKnown RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 TMED5Q9Y3A6 229 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 CHD8Q9HCK8 2581 aa6.71□□□□□ -1.33
NPLOC4-221ENST00000625705 SEC16AO15027 2179 aa6.71□□□□□ -1.33
NPLOC4-221ENST00000625705 TRPC5OSA6NMA1 111 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 WASHC1A8K0Z3 465 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 A8MVJ9 347 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 SLCO1B7G3V0H7 640 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 WWP2O00308 870 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 PDPK1O15530 556 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 VPS4BO75351 444 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 ITGA10O75578 1167 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 C1QL1O75973 258 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 DDAH2O95865 285 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 JUNP05412 331 aaKnown RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 SDC1P18827 310 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 DDCP20711 480 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 PRPH2P23942 346 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 SSTR4P31391 388 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 MPIP34949 423 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 PTGER1P34995 402 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 RPL3P39023 403 aaKnown RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 CD97P48960 835 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 CYB561P49447 251 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 GPR143P51810 404 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 NCBP2P52298 156 aaKnown RBP eCLIP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 IGLV3-21P80748 117 aaPredicted RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 TLE1Q04724 770 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 OR1C1Q15619 314 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 MAPKAPK3Q16644 382 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 SPRED3Q2MJR0 410 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 ZNF750Q32MQ0 723 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 RFTN2Q52LD8 501 aaPredicted RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 IGFL3Q6UXB1 125 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 RNF165Q6ZSG1 346 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 R3HCC1LQ7Z5L2 792 aaKnown RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 ATCAYQ86WG3 371 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 LGI4Q8N135 537 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 CYP4Z2PQ8N1L4 340 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 LIX1Q8N485 282 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 AMER2Q8N7J2 671 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 RBMXL3Q8N7X1 1067 aaKnown RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 TMEM178AQ8NBL3 297 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 APCDD1LQ8NCL9 501 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 CATSPER1Q8NEC5 780 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 NFAM1Q8NET5 270 aaPredicted RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 ADCY4Q8NFM4 1077 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 ELP5Q8TE02 316 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 PTPMT1Q8WUK0 201 aaPredicted RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 PSMF1Q92530 271 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 SENP5Q96HI0 755 aaPredicted RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 MAGED4Q96JG8 741 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 PRPF18Q99633 342 aaKnown RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 RNF32Q9H0A6 362 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 EPN3Q9H201 632 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 TUBB1Q9H4B7 451 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 LIN28AQ9H9Z2 209 aaKnown RBP6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 CXorf21Q9HAI6 301 aa6.71□□□□□ -1.34
NPLOC4-221ENST00000625705 SLC35C2Q9NQQ7 365 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms