RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SPIN4Q56A73 249 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 ZNF789Q5FWF6 425 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TEX30Q5JUR7 227 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 S100A7AQ86SG5 101 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 CBLN2Q8IUK8 224 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 SULF1Q8IWU6 871 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 GPR65Q8IYL9 337 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 SVBPQ8N300 66 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 OR52P1PQ8NH57 321 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 OR1S1Q8NH92 325 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TADA1Q96BN2 335 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TCEAL4Q96EI5 215 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TMEM41AQ96HV5 264 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 C12orf66Q96MD2 445 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 FEVQ99581 238 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS11-209ENST00000622309 NXF3Q9H4D5 531 aaKnown RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 DDX31Q9H8H2 851 aaKnown RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 NDUFB11Q9NX14 153 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 COX16Q9P0S2 106 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 RCOR3Q9P2K3 495 aaPredicted RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 ZNF214Q9UL59 606 aaPredicted RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 BRCA2P51587 3418 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 ARID2Q68CP9 1835 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 LOC390937A0A1W2PQ73 354 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 ADM5C9JUS6 153 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 STX11O75558 287 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 JCHAINP01591 159 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TCRBP04435 133 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 NFYAP23511 347 aaPredicted RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 SPCS3P61009 180 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 SLC3A1Q07837 685 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 GK2Q14410 553 aaPredicted RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 AKIRIN2Q53H80 203 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 XKR7Q5GH72 579 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 OVOS1Q6IE37 1185 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 FGD2Q7Z6J4 655 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 VTCN1Q7Z7D3 282 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 ASPGQ86U10 573 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 BPIFCQ8NFQ6 507 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 OR14A16Q8NHC5 309 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 THAP6Q8TBB0 222 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TOX2Q96NM4 488 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 MAP3K3Q99759 626 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TCF25Q9BQ70 676 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 KATNB1Q9BVA0 655 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 B3GNT5Q9BYG0 378 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 FN3KQ9H479 309 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 BEX1Q9HBH7 125 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 CRTAC1Q9NQ79 661 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 SEMA3GQ9NS98 782 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 DOCK5Q9H7D0 1870 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 BLACEA4D250 179 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 E9PI62 339 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 CSO75390 466 aaKnown RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 SCAF4O95104 1147 aaKnown RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 TFP02787 698 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 ALPIP09923 528 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 PPM1AP35813 382 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 CTSCP53634 463 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 RAB33AQ14088 237 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 ERV3-1Q14264 604 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 GOLGA7BQ2TAP0 167 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 LRRN1Q6UXK5 716 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 NUDT18Q6ZVK8 323 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 VSIG10LQ86VR7 867 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 DMRTC2Q8IXT2 367 aaPredicted RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 PEX11GQ96HA9 241 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 TPD52L3Q96J77 140 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 ZC3H10Q96K80 434 aaKnown RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 TBL1YQ9BQ87 522 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 THAP7Q9BT49 309 aaPredicted RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 SAP130Q9H0E3 1048 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 MROH8Q9H579 483 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 JPH1Q9HDC5 661 aaPredicted RBP7.53□□□□□ -1.2
VPS11-209ENST00000622309 CLEC2DQ9UHP7 191 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 DMRT1Q9Y5R6 373 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 USP3Q9Y6I4 520 aa7.53□□□□□ -1.2
VPS11-209ENST00000622309 MOXD2PA6NHM9 499 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 J3KR12 359 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 HAS3O00219 553 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 ZNF197O14709 1029 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 SLC31A2O15432 143 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 IRAK2O43187 625 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 TPST2O60704 377 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 GLP2RO95838 553 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 TBX18O95935 607 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 ADH1CP00326 375 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CXCL2P19875 107 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 WARSP23381 471 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 RPS12P25398 132 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 ATP5A1P25705 553 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 MATKP42679 507 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 BDKRB1P46663 353 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 STK19P49842 368 aaPredicted RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 EPHA4P54764 986 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 MEF2AQ02078 507 aaPredicted RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 ST3GAL2Q16842 350 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 ACER2Q5QJU3 275 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms