RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ACADSP16219 412 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ATP6V1C1P21283 382 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 CNTFP26441 200 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 HNRNPFP52597 415 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 HK2P52789 917 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 PLA2G16P53816 162 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 RAB38P57729 211 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 NAB1Q13506 487 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 RUNX2Q13950 521 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 KPNB1Q14974 876 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 TAF11Q15544 211 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 CHI3L2Q15782 390 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 HSPB2Q16082 182 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 RIPPLY2Q5TAB7 128 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ATG16L1Q676U5 607 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 OPN5Q6U736 354 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 NXPE4Q6UWF7 544 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 PAMR1Q6UXH9 720 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 THOC6Q86W42 341 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 ZNF595Q8IYB9 648 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 KLHDC8AQ8IYD2 350 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 TEX9Q8N6V9 391 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 WFDC11Q8NEX6 87 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 TTLQ8NG68 377 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 MBD6Q96DN6 1003 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 SMR3AQ99954 134 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 NPLQ9BXD5 320 aaPredicted RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 ARMCX1Q9P291 453 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 CBLCQ9ULV8 474 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 CLDN16Q9Y5I7 305 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 NSD1Q96L73 2696 aaPredicted RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 MYOCOSA0A1B0GUC4 107 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 TUBAL3A6NHL2 446 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 SYT5O00445 386 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ZNF195O14628 629 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 GYG2O15488 501 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 PLIN3O60664 434 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 HCN1O60741 890 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 KRT36O76013 467 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 PSMG1O95456 288 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 CCL3P10147 92 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ALOX15P16050 662 aaPredicted RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 TNNI3P19429 210 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ENDOUP21128 410 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 TACR1P25103 407 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ARRB2P32121 409 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 CPOXP36551 454 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 PGGT1BP53609 377 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 RNF4P78317 190 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 FOXO1Q12778 655 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 STX4Q12846 297 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 RCN2Q14257 317 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 FRG1Q14331 258 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 DEFB113Q30KQ7 82 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 MROH9Q5TGP6 573 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 TRIM40Q6P9F5 258 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 MAVSQ7Z434 540 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 NUDCD3Q8IVD9 361 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 MORN4Q8NDC4 146 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 TMEM52Q8NDY8 209 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 OR5L2Q8NGL0 311 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 OR14A16Q8NHC5 309 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 FAM222BQ8WU58 562 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 MS4A6EQ96DS6 147 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 C18orf12Q96KH6 178 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 EGFL8Q99944 293 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 MCMBPQ9BTE3 642 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ALOXE3Q9BYJ1 711 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 REXO4Q9GZR2 422 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 AICDAQ9GZX7 198 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 COPS7BQ9H9Q2 264 aaPredicted RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 THAP1Q9NVV9 213 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 TUBA8Q9NY65 449 aaPredicted RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 SLC17A6Q9P2U8 582 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 STX18Q9P2W9 335 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 COPS7AQ9UBW8 275 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ATG4BQ9Y4P1 393 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 PSAT1Q9Y617 370 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 NINQ8N4C6 2090 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 LRIT2A6NDA9 550 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 C17orf105B2RV13 164 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 ITM2AO43736 263 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 H2AFYO75367 372 aaKnown RBP7.21□□□□□ -1.26
CLK1-215ENST00000621181 AHSGP02765 367 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 PROCP04070 461 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 INHBBP09529 407 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 FREM3P0C091 2139 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 PGAM1P18669 254 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 GABRB3P28472 473 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 PIGAP37287 484 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 ASCL1P50553 236 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 AQP5P55064 265 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 RCN1Q15293 331 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 PCBP2Q15366 365 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLK1-215ENST00000621181 HYAL4Q2M3T9 481 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 SLC22A10Q63ZE4 541 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 SBSNQ6UWP8 590 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 CLEC9AQ6UXN8 241 aa7.21□□□□□ -1.26
CLK1-215ENST00000621181 TMIGD1Q6UXZ0 262 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms