RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 DOHHQ9BU89 302 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 DUSP23Q9BVJ7 150 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 RBM4Q9BWF3 364 aaKnown RBP11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 PDE7BQ9NP56 450 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 AASSQ9UDR5 926 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 TECTAO75443 2155 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 H0YAE9 185 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 SLC28A2O43868 658 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 NME6O75414 186 aaPredicted RBP11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 FHP07954 510 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 GLB1P16278 677 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 SELENOWP63302 87 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 PRR5P85299 388 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 NR1D2Q14995 579 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 BHLHB9Q6PI77 547 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 TMEM64Q6YI46 380 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 SAMD14Q8IZD0 417 aaPredicted RBP11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 METTL27Q8N6F8 245 aaPredicted RBP11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 OR6C4Q8NGE1 309 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 ELP4Q96EB1 424 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 C3orf14Q9HBI5 128 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 A4GALTQ9NPC4 353 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 TMEM9Q9P0T7 183 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 HCN3Q9P1Z3 774 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 PCDHGA8Q9Y5G5 932 aa11.94□□□□□ -0.5
TNFAIP3-209ENST00000619035 CACNA1EQ15878 2313 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 TMEM247A6NEH6 219 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 EMC8O43402 210 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 DUX1O43812 170 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 FGF17O60258 216 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 MED26O95402 600 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 HPRP00739 348 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 EPHA8P29322 1005 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ARL4DP49703 201 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 KHKP50053 298 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 DAPP51397 102 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CLCN2P51788 898 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CEBPEQ15744 281 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 MEP1AQ16819 746 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ZNF528Q3MIS6 628 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 KCTD21Q4G0X4 260 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 IQCCQ4KMZ1 466 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SHQ1Q6PI26 577 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 TSEN54Q7Z6J9 526 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 NUP43Q8NFH3 380 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 OR56A1Q8NGH5 318 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CEP76Q8TAP6 659 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SFXN5Q8TD22 340 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 LZICQ8WZA0 190 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 DGCR14Q96DF8 476 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 C16orf58Q96GQ5 468 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 C7orf34Q96L11 122 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ING2Q9H160 280 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 DDX18Q9NVP1 670 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 NLGN3Q9NZ94 848 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 P2RX2Q9UBL9 471 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 PLCL2Q9UPR0 1127 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SAMHD1Q9Y3Z3 626 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ZNF451Q9Y4E5 1061 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CEPT1Q9Y6K0 416 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ZDBF2Q9HCK1 2354 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SCN2AQ99250 2005 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 A8MU76 341 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CYR61O00622 381 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ZBTB11O95625 1053 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 IFNA14P01570 189 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 TFPTP0C1Z6 253 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 NR2F1P10589 423 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CPMP14384 443 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 FUT4P22083 530 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ALDH3B2P48448 385 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 TPD52P55327 224 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 PCBP3P57721 371 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SKP1P63208 163 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 GPLD1P80108 840 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SYPL1Q16563 259 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CTU2Q2VPK5 515 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 HLA-BQ31612 363 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 CCDC80Q76M96 950 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 OLIG3Q7RTU3 272 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SLC30A8Q8IWU4 369 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 TMEM105Q8N8V8 129 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 DTWD2Q8NBA8 298 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 NPLQ9BXD5 320 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 ADNPQ9H2P0 1102 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 RUBCNLQ9H714 662 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 USE1Q9NZ43 259 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 PDP1Q9P0J1 537 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 IFT80Q9P2H3 777 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 SH3GLB1Q9Y371 365 aa11.93□□□□□ -0.5
TNFAIP3-209ENST00000619035 VPS13AQ96RL7 3174 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 A0A1B0GTQ1 180 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 PRAMEF25A6NGN4 478 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 CHST10O43529 356 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 CDC123O75794 336 aaPredicted RBP11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 PNLIPP16233 465 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 AGXTP21549 392 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 EPHA2P29317 976 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms