RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PRSS53Q2L4Q9 553 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CNPY1Q3B7I2 92 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 KCTD21Q4G0X4 260 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 LRRC23Q53EV4 343 aaPredicted RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TMEM35AQ53FP2 167 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 RNF220Q5VTB9 566 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 KHDRBS2Q5VWX1 349 aaKnown RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 KANK2Q63ZY3 851 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CPZQ66K79 652 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 NXNQ6DKJ4 435 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 MRM1Q6IN84 353 aaKnown RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 OGFOD2Q6N063 350 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TMEM205Q6UW68 189 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 KIRREL2Q6UWL6 708 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 RNF165Q6ZSG1 346 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 Q6ZSR9 355 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 LANCL3Q6ZV70 420 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ASB18Q6ZVZ8 466 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 LARP4Q71RC2 724 aaKnown RBP eCLIP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 NDUFAF7Q7L592 441 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 MRGPREQ86SM8 312 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CUZD1Q86UP6 607 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ATCAYQ86WG3 371 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 DHFR2Q86XF0 187 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ERI1Q8IV48 349 aaKnown RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 KBTBD2Q8IY47 623 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 GALNT16Q8N428 558 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ZADH2Q8N4Q0 377 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 HORMAD2Q8N7B1 307 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TRIML2Q8N7C3 387 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ACOT4Q8N9L9 421 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PLPP5Q8NEB5 264 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 OR2L5Q8NG80 312 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 OR2T11Q8NH01 316 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 METTL6Q8TCB7 284 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 METTL21AQ8WXB1 218 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TSLPQ969D9 159 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 COL26A1Q96A83 441 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 EME1Q96AY2 570 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 C8orf44Q96CB5 159 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 REPS1Q96D71 796 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 C11orf24Q96F05 449 aaPredicted RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CMTM7Q96FZ5 175 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 APIPQ96GX9 242 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PEX11GQ96HA9 241 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CLPTM1LQ96KA5 538 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 C3orf30Q96M34 536 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 RDH12Q96NR8 316 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 SH3GL1Q99961 368 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 WDR77Q9BQA1 342 aaPredicted RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 C9orf16Q9BUW7 83 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 SLC29A3Q9BZD2 475 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ACPTQ9BZG2 426 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 VN1R1Q9GZP7 353 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 REXO4Q9GZR2 422 aaKnown RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 LHPPQ9H008 270 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 EPS8L2Q9H6S3 715 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PNPLA3Q9NST1 481 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CCM2LQ9NUG4 571 aaPredicted RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 RIC8BQ9NVN3 520 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 P4HTMQ9NXG6 502 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 MS4A12Q9NXJ0 267 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ACTR3BQ9P1U1 418 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TMEM181Q9P2C4 612 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TRPC4Q9UBN4 977 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 GIMAP2Q9UG22 337 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CD300AQ9UGN4 299 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 MRPS33Q9Y291 106 aaKnown RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ATG4BQ9Y4P1 393 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ASB4Q9Y574 426 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PCDHGA11Q9Y5H2 935 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 HS3ST3B1Q9Y662 390 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TEX15Q9BXT5 2789 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CROCCQ5TZA2 2017 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 IGKV3D-11A0A0A0MRZ8 115 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 A0A0A6YYD5 115 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 IGHV3-20A0A0C4DH32 117 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 A0A1W2PR48 441 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SERTM1A2A2V5 107 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 H0YAE9 185 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 K7EM74 188 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CLDN4O14493 209 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SDHDO14521 159 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 AZIN1O14977 448 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 B4GALT2O60909 372 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 GMNNO75496 209 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SKAP2O75563 359 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CDC123O75794 336 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SEMA3DO95025 777 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 WISP1O95388 367 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 SERPINA7P05543 415 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 KLK1P06870 262 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 FHP07954 510 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 CELA2AP08217 269 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 UBTFL6P0CB48 400 aaPredicted RBP4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ZCCHC18P0CG32 403 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 PLA2G2AP14555 144 aa4.91□□□□□ -1.62
SHMT1-211ENST00000618902 ACPPP15309 386 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms