RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 FRMD6Q96NE9 622 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 TM9SF2Q99805 663 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 RNF121Q9H920 327 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 MAN2C1Q9NTJ4 1040 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 ZSCAN32Q9NX65 697 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 DKK3Q9UBP4 350 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 FBXW2Q9UKT8 454 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 A0A1W2PRQ8 180 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 LILRB3O75022 631 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 ALPPP05187 535 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 ACADLP28330 430 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 NNMTP40261 264 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 PLK5Q496M5 336 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 C3orf38Q5JPI3 329 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 SNAP47Q5SQN1 464 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 HSDL2Q6YN16 418 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 ZNF438Q7Z4V0 828 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 TBC1D19Q8N5T2 526 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 OR5AR1Q8NGP9 310 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 SETD7Q8WTS6 366 aaKnown RBP19.28■□□□□ 0.68
NEK3-208ENST00000618534 GATAD2BQ8WXI9 593 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 OTUB1Q96FW1 271 aaPredicted RBP19.28■□□□□ 0.68
NEK3-208ENST00000618534 PPP1R16AQ96I34 528 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 ZFYVE19Q96K21 471 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 COQ10AQ96MF6 247 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 FNDC11Q9BVV2 318 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 CTPS2Q9NRF8 586 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 ASF1AQ9Y294 204 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 MAU2Q9Y6X3 613 aa19.28■□□□□ 0.68
NEK3-208ENST00000618534 KPNA3O00505 521 aaPredicted RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 YES1P07947 543 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 CCT3P49368 545 aaKnown RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.27■□□□□ 0.68
NEK3-208ENST00000618534 CRTC2Q53ET0 693 aaPredicted RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 SLC25A30Q5SVS4 291 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 LCTLQ6UWM7 567 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 FAM83HQ6ZRV2 1179 aaPredicted RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 ATP6V1C2Q8NEY4 427 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 OR52P1PQ8NH57 321 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 RASSF5Q8WWW0 418 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 MS4A8Q9BY19 250 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 PLA2G12AQ9BZM1 189 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 ZCCHC2Q9C0B9 1178 aaKnown RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 KCNK12Q9HB15 430 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 NDRG2Q9UN36 371 aaKnown RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 SF3B6Q9Y3B4 125 aaKnown RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 LRRK1Q38SD2 2015 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 SPINT1O43278 529 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 POP7O75817 140 aaKnown RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 NR2F6P10588 404 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 HOXD10P28358 340 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 SNAPC1Q16533 368 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 RAET1GQ6H3X3 334 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 CD300LDQ6UXZ3 194 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 PDZD3Q86UT5 571 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 PXYLP1Q8TE99 480 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 XAGE5Q8WWM1 108 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 OR51I1Q9H343 314 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 ANKRA2Q9H9E1 313 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 CUEDC1Q9NWM3 386 aaPredicted RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 TEX10Q9NXF1 929 aaPredicted RBP19.27■□□□□ 0.68
NEK3-208ENST00000618534 P2RX2Q9UBL9 471 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 TAC3Q9UHF0 121 aa19.27■□□□□ 0.68
NEK3-208ENST00000618534 CACNB4O00305 520 aaPredicted RBP19.26■□□□□ 0.67
NEK3-208ENST00000618534 STK25O00506 426 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 EFNB1P98172 346 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 CDK5Q00535 292 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 COX10Q12887 443 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 ZNF628Q5EBL2 1059 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 QSOX2Q6ZRP7 698 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 SHFQ7M4L6 423 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 KIF18BQ86Y91 864 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 ENKURQ8TC29 256 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 RNFT2Q96EX2 444 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 MED18Q9BUE0 208 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 LHX9Q9NQ69 397 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.26■□□□□ 0.67
NEK3-208ENST00000618534 SAGE1Q9NXZ1 904 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 PRKAB1Q9Y478 270 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 TMPRSS11DO60235 418 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 TBX19O60806 448 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 APEX1P27695 318 aaKnown RBP19.26■□□□□ 0.67
NEK3-208ENST00000618534 CD79BP40259 229 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 MLLT3P42568 568 aaPredicted RBP19.26■□□□□ 0.67
NEK3-208ENST00000618534 FRKP42685 505 aaPredicted RBP19.26■□□□□ 0.67
NEK3-208ENST00000618534 FABP5Q01469 135 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 QPRTQ15274 297 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 ZNF730Q6ZMV8 503 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 ZFP41Q8N8Y5 198 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 MORN4Q8NDC4 146 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 C17orf50Q8WW18 174 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 EGLN3Q9H6Z9 239 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 TRPC4Q9UBN4 977 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 GPR52Q9Y2T5 361 aa19.26■□□□□ 0.67
NEK3-208ENST00000618534 PCYT1BQ9Y5K3 369 aaPredicted RBP19.26■□□□□ 0.67
NEK3-208ENST00000618534 FEZF1A0PJY2 475 aa19.25■□□□□ 0.67
NEK3-208ENST00000618534 SLC30A4O14863 429 aa19.25■□□□□ 0.67
NEK3-208ENST00000618534 EPPINO95925 133 aa19.25■□□□□ 0.67
NEK3-208ENST00000618534 NR2F1P10589 423 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms