RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TRIM54Q9BYV2 358 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 KLHL31Q9H511 634 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ZMAT3Q9HA38 289 aaKnown RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 POPDC3Q9HBV1 291 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CHRAC1Q9NRG0 131 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ADAMTS6Q9UKP5 1117 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 PROCRQ9UNN8 238 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 EXO1Q9UQ84 846 aaKnown RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 ZNF148Q9UQR1 794 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CCDC189A1A4V9 331 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 A8MUA0 341 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 PLOD2O00469 737 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 KCNAB3O43448 404 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 TPM3P06753 285 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HIST1H2AGP0C0S8 130 aaPredicted RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 EGR1P18146 543 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HIST1H2ADP20671 130 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HNRNPH1P31943 449 aaKnown RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 MSH2P43246 934 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 TRPC1P48995 793 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HNRNPH2P55795 449 aaKnown RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 NRG3P56975 720 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 TNFRSF17Q02223 184 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 NAE1Q13564 534 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SETDB1Q15047 1291 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SBSNQ6UWP8 590 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 TREML4Q6UXN2 200 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 BEND4Q6ZU67 534 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 VN1R5Q7Z5H4 357 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 LAS2Q8IYD9 372 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 ZNF321PQ8N8H1 164 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 ZNF615Q8N8J6 731 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 C2CD4AQ8NCU7 369 aaPredicted RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 MCUQ8NE86 351 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 FAM216AQ8WUB2 273 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SLC44A1Q8WWI5 657 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HSD17B8Q92506 261 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SLC35A4Q96G79 324 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SENP5Q96HI0 755 aaPredicted RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 GMPPAQ96IJ6 420 aaPredicted RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 LCORQ96JN0 433 aaPredicted RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 HIST1H2AHQ96KK5 128 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 CCDC42Q96M95 316 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 CSF3RQ99062 836 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HIST1H2AJQ99878 128 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 MACROD1Q9BQ69 325 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 H2AFJQ9BTM1 129 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 RBM4Q9BWF3 364 aaKnown RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 SAP130Q9H0E3 1048 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SPNS1Q9H2V7 528 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 C10orf88Q9H8K7 445 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 EML4Q9HC35 981 aaKnown RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 MGAT4BQ9UQ53 548 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 CFL2Q9Y281 166 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 OARD1Q9Y530 152 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 MAD1L1Q9Y6D9 718 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HEATR5AQ86XA9 2040 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SLC22A20A6NK97 555 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 G3V3Y1 287 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 CBFA2T2O43439 604 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SYF2O95926 243 aaKnown RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 SLC35E2BP0CK96 405 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SLC35E2P0CK97 266 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 PCMT1P22061 227 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 CPOXP36551 454 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 LIMS1P48059 325 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SERPINB4P48594 390 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 GAS1P54826 345 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 WNT3P56703 355 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 FAM27E3Q08E93 113 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 ASPHQ12797 758 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 STX4Q12846 297 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 EIPR1Q53HC9 387 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 FAM182AQ5T1J6 154 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 THOC6Q86W42 341 aaKnown RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 IFNEQ86WN2 208 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 GRAMD2AQ8IUY3 354 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 SYCE1Q8N0S2 351 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 UBE2E3Q969T4 207 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 EFCAB11Q9BUY7 163 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 ZNF747Q9BV97 191 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 HEMGNQ9BXL5 484 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 MS4A8Q9BY19 250 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 TRIM2Q9C040 744 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 GOLPH3Q9H4A6 298 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 KLHL28Q9NXS3 571 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 ZNF639Q9UID6 485 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 TRMT6Q9UJA5 497 aaKnown RBP4.12□□□□□ -1.75
SNCA-213ENST00000618500 ABCG2Q9UNQ0 655 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 KCNE2Q9Y6J6 123 aa4.12□□□□□ -1.75
SNCA-213ENST00000618500 OR6C70A6NIJ9 312 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 E7EVH7 732 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 NRDCO43847 1150 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 LMX1BO60663 402 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ABCB1P08183 1280 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 HIST1H1TP22492 207 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 PAX7P23759 505 aa4.11□□□□□ -1.75
SNCA-213ENST00000618500 ATP5A1P25705 553 aaKnown RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 DSCR4P56555 118 aaPredicted RBP4.11□□□□□ -1.75
SNCA-213ENST00000618500 UBASH3AP57075 661 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms