RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PPP1CAP62136 330 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 HOXC5Q00444 222 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
CIITA-212ENST00000618207 PTGES3Q15185 160 aaKnown RBP11.7□□□□□ -0.54
CIITA-212ENST00000618207 ZIC1Q15915 447 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 PRSS41Q7RTY9 318 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 ANKRD13BQ86YJ7 626 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 OR4N4Q8N0Y3 316 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 TBC1D19Q8N5T2 526 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 TIMMDC1Q9NPL8 285 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 THSD1Q9NS62 852 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 P2RX2Q9UBL9 471 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 POFUT2Q9Y2G5 429 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 PRR19A6NJB7 356 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 CCDC85CA6NKD9 419 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 NDUFB5O43674 189 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 CHRM4P08173 479 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 DRD2P14416 443 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 GGT2P36268 569 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 MLLT10P55197 1068 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 HPCAP84074 193 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 KCNC4Q03721 635 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 TMEM35AQ53FP2 167 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 FRMPD2BQ6IN97 320 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 ZNF438Q7Z4V0 828 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 RAB2BQ8WUD1 216 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 FBLIM1Q8WUP2 373 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 ZNF607Q96SK3 696 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 DOK1Q99704 481 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 CENPOQ9BU64 300 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 TPSD1Q9BZJ3 242 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 DUSP21Q9H596 190 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 SNX7Q9UNH6 387 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 SEMA4FO95754 770 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 STSP08842 583 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 HSMCR30P0CW71 290 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 F3P13726 295 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 DRD1P21728 446 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 PPP2R1BP30154 601 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 FRKP42685 505 aaPredicted RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 TMBIM6P55061 237 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 CCDC85BQ15834 202 aaPredicted RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 ZNF425Q6IV72 752 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 FBXO42Q6P3S6 717 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 SLC16A12Q6ZSM3 486 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 BCDIN3DQ7Z5W3 292 aaKnown RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 SMRP1Q8NCR6 262 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 ANKK1Q8NFD2 765 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 FKBP10Q96AY3 582 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 ARSGQ96EG1 525 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 GDF15Q99988 308 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 A4GALTQ9NPC4 353 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 ACSS1Q9NUB1 689 aaPredicted RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 OR6C2Q9NZP2 312 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 KLF15Q9UIH9 416 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 ADAM29Q9UKF5 820 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 PSME2Q9UL46 239 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 TMCC3Q9ULS5 477 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 MRPS2Q9Y399 296 aaKnown RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 HEBP2Q9Y5Z4 205 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 TNNI3P19429 210 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 CNR2P34972 360 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 AHRP35869 848 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 RXRGP48443 463 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 STXBP1P61764 594 aaKnown RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 ABATP80404 500 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 DEFB110Q30KQ9 67 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 COLEC12Q5KU26 742 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 DCST1Q5T197 706 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 ZNF605Q86T29 641 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 MFSD9Q8NBP5 474 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 SLC9A6Q92581 669 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 GPR174Q9BXC1 333 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 GABARAPL3Q9BY60 117 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 PITHD1Q9GZP4 211 aaPredicted RBP11.69□□□□□ -0.54
CIITA-212ENST00000618207 ACOT13Q9NPJ3 140 aa11.69□□□□□ -0.54
CIITA-212ENST00000618207 ZNF701M0R085 212 aaPredicted RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 LDB3O75112 727 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 SLC35G6P0C7Q6 338 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 UGT2B7P16662 529 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ITIH1P19827 911 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 CHMP24386 653 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 NCS1P62166 190 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 FUT5Q11128 374 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ILF3Q12906 894 aaKnown RBP eCLIP11.68□□□□□ -0.54
CIITA-212ENST00000618207 TARDBPQ13148 414 aaKnown RBP eCLIP11.68□□□□□ -0.54
CIITA-212ENST00000618207 ADPRMQ3LIE5 342 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 SLC48A1Q6P1K1 146 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ASPGQ86U10 573 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 NRROSQ86YC3 692 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 SLC22A18ASQ8N1D0 253 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 NUP43Q8NFH3 380 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 OR6T1Q8NGN1 323 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 NDNFQ8TB73 568 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 TBC1D15Q8TC07 691 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms