RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 DPP6P42658 865 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 GPR1P46091 355 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 PIK3CGP48736 1102 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 MRPL19P49406 292 aaKnown RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 GTF2H3Q13889 308 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 ZNF460Q14592 562 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 TEAD4Q15561 434 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 OR4D1Q15615 310 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 C9orf152Q5JTZ5 239 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 SBSNQ6UWP8 590 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 CHST15Q7LFX5 561 aaPredicted RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 PRSS58Q8IYP2 241 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 SFRP1Q8N474 314 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 C10orf53Q8N6V4 93 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 RASGEF1AQ8N9B8 481 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 WDSUB1Q8N9V3 476 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 MAFAQ8NHW3 353 aaPredicted RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 ASB11Q8WXH4 323 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 ELMO1Q92556 727 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 RFKQ969G6 155 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 GATA5Q9BWX5 397 aaPredicted RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 ZNF358Q9NW07 568 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 A0A1W2PP55 124 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 HRO43593 1189 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 LY86O95711 162 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 NDUFV2P19404 249 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 FPR3P25089 353 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 CDK3Q00526 305 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 SLAMF1Q13291 335 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 ANGPT1Q15389 498 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 CES4AQ5XG92 561 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 TMEM92Q6UXU6 159 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 SPEM1Q8N4L4 309 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 CHDHQ8NE62 594 aaPredicted RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 OR9A1PQ8NGU1 263 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 LKAAEAR1Q8TD35 194 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 SNX33Q8WV41 574 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 EEF1AKMT1Q8WVE0 214 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 SCAMP4Q969E2 229 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 TUBGCP3Q96CW5 907 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 DCLRE1CQ96SD1 692 aaKnown RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 DUSP26Q9BV47 211 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 SLC17A9Q9BYT1 436 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 C19orf12Q9NSK7 152 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 TO15178 435 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 ASGR2P07307 311 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 POLR2IP36954 125 aaKnown RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 VEGFCP49767 419 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 ABATP80404 500 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 MEF2AQ02078 507 aaPredicted RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 RIPPLY1Q0D2K3 151 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 CCDC85BQ15834 202 aaPredicted RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 CTF1Q16619 201 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 TIGD6Q17RP2 521 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 HFEQ30201 348 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 TMEM236Q5W0B7 351 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 TCEAL6Q6IPX3 200 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 Q7L0L9 218 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 NUP54Q7Z3B4 507 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 LRRTM4Q86VH4 590 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 YIPF7Q8N8F6 280 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 Q8NFD4 153 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 ELP5Q8TE02 316 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 MAP3K3Q99759 626 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 WRAP53Q9BUR4 548 aaKnown RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 ADI1Q9BV57 179 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 EDEM2Q9BV94 578 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 GSTO2Q9H4Y5 243 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 PHPT1Q9NRX4 125 aaPredicted RBP8.36□□□□□ -1.07
VPS11-206ENST00000614944 TMEM45AQ9NWC5 275 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 GALPQ9UBC7 116 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 PCDHGB6Q9Y5F9 930 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 PCDHGB2Q9Y5G2 931 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 PCDHGA6Q9Y5G7 932 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 PCDHGA5Q9Y5G8 931 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 PCDHGA1Q9Y5H4 931 aa8.36□□□□□ -1.07
VPS11-206ENST00000614944 A0A0U1RQS6 177 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 TMEM210A6NLX4 147 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 SCAMP1O15126 338 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 MED6O75586 246 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 MLYCDO95822 493 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 ILF3Q12906 894 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS11-206ENST00000614944 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 PABPC1L2AQ5JQF8 200 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 COLEC12Q5KU26 742 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 MLIPQ5VWP3 458 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 ELP2Q6IA86 826 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 RAB11FIP2Q7L804 512 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 ATCAYQ86WG3 371 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 GPSM1Q86YR5 675 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 NLGN4XQ8N0W4 816 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 KBTBD8Q8NFY9 601 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 CADM4Q8NFZ8 388 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 SOX7Q9BT81 388 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 TWSG1Q9GZX9 223 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 IFT80Q9P2H3 777 aaPredicted RBP8.35□□□□□ -1.07
VPS11-206ENST00000614944 SERGEFQ9UGK8 458 aa8.35□□□□□ -1.07
VPS11-206ENST00000614944 KLHL21Q9UJP4 597 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms