RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SLC2A12Q8TD20 617 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 MOAP1Q96BY2 351 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 NSL1Q96IY1 281 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 MESP1Q9BRJ9 268 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 INPP5KQ9BT40 448 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 OR8D2Q9GZM6 311 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 CXorf36Q9H7Y0 433 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 SIRT3Q9NTG7 399 aaPredicted RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 ARL8BQ9NVJ2 186 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 DDX18Q9NVP1 670 aaKnown RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.71□□□□□ -0.21
CD48-203ENST00000613788 GID8Q9NWU2 228 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 ZNF639Q9UID6 485 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 PPIEQ9UNP9 301 aaKnown RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 CDC14CA4D256 554 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 C1QTNF9BB2RNN3 333 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 MRASO14807 208 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 EMC8O43402 210 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 HPP00738 406 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 C1QTNF9P0C862 333 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 UQCRC2P22695 453 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 SOAT1P35610 550 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 CCT3P49368 545 aaKnown RBP13.7□□□□□ -0.22
CD48-203ENST00000613788 SLC26A5P58743 744 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 SRSF6Q13247 344 aaKnown RBP13.7□□□□□ -0.22
CD48-203ENST00000613788 NFYCQ13952 458 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 REP15Q6BDI9 236 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 RETREG3Q86VR2 466 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 SPACA3Q8IXA5 215 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 OR2L13Q8N349 312 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 NFAM1Q8NET5 270 aaPredicted RBP13.7□□□□□ -0.22
CD48-203ENST00000613788 OR7G2Q8NG99 324 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 OR1N1Q8NGS0 311 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 SFXN5Q8TD22 340 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 RCN3Q96D15 328 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 MAGED4Q96JG8 741 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 IMMP1LQ96LU5 166 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 FER1L6-AS2Q96M78 137 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 PHF12Q96QT6 1004 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 NPAS2Q99743 824 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 NTMQ9P121 344 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 MAP10Q9P2G4 905 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 BCAP29Q9UHQ4 241 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 C19orf53Q9UNZ5 99 aaPredicted RBP13.7□□□□□ -0.22
CD48-203ENST00000613788 ERVK-11Q9UQG0 969 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 ERVK-19Q9WJR5 959 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 CCDC88CQ9P219 2028 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 AKAP13Q12802 2813 aa13.7□□□□□ -0.22
CD48-203ENST00000613788 TMEM8BA6NDV4 472 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 UPK1AO00322 258 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 EBAG9O00559 213 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 AIM2O14862 343 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 NKX2-8O15522 239 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 COQ9O75208 318 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 DDAH2O95865 285 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 GSNP06396 782 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 S1PR1P21453 382 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 CALB2P22676 271 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 CDKN2CP42773 168 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 AP2B1P63010 937 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 ART3Q13508 389 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 ATP1A4Q13733 1029 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 LRIF1Q5T3J3 769 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 FHL5Q5TD97 284 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 PLAG1Q6DJT9 500 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 C6orf89Q6UWU4 347 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 CCDC81Q6ZN84 652 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 NUP43Q8NFH3 380 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 OR56A1Q8NGH5 318 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 M1APQ8TC57 530 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 DOK4Q8TEW6 326 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 ZNF721Q8TF20 911 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 ROPN1LQ96C74 230 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 VMP1Q96GC9 406 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 DCBLD2Q96PD2 775 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 PAIP1Q9H074 479 aaKnown RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 OR10A5Q9H207 317 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 ZNF160Q9HCG1 818 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 ZCCHC3Q9NUD5 404 aaKnown RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 FBXL4Q9UKA2 621 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 CFL2Q9Y281 166 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 PCDHB14Q9Y5E9 798 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 CACNA1AO00555 2505 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 FREM2Q5SZK8 3169 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 OR6C76A6NM76 312 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 HRKO00198 91 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 EFSO43281 561 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 PRAMEF2O60811 474 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 IGKV3-11P04433 115 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 PRKAR1AP10644 381 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 WT1P19544 449 aaPredicted RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 SSTR4P31391 388 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 SOX18P35713 384 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 CHI3L1P36222 383 aaPredicted RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 CLCN2P51788 898 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 GPR143P51810 404 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms