RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PGS1Q32NB8 556 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 LSM12Q3MHD2 195 aaKnown RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 ZNF385BQ569K4 471 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 ZNF628Q5EBL2 1059 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 FAM111BQ6SJ93 734 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 IGFL2Q6UWQ7 119 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 CAMKMTQ7Z624 323 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 ARMC10Q8N2F6 343 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 HORMAD2Q8N7B1 307 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 ZNF321PQ8N8H1 164 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 TEX19Q8NA77 164 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 GLB1L3Q8NCI6 653 aaPredicted RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 VPS37AQ8NEZ2 397 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 OR7A2PQ8NGA2 310 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 SUN3Q8TAQ9 357 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 NUBPLQ8TB37 319 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 DOK4Q8TEW6 326 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 TESCQ96BS2 214 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 CTHRC1Q96CG8 243 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 COQ8BQ96D53 544 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 RILPQ96NA2 401 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 UTP23Q9BRU9 249 aaKnown RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 DUSP26Q9BV47 211 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 OR10A5Q9H207 317 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 GLIPR2Q9H4G4 154 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 FGFR1OP2Q9NVK5 253 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 DDX18Q9NVP1 670 aaKnown RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 MYOTQ9UBF9 498 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 PRODH2Q9UF12 536 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 DCTN4Q9UJW0 460 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 TRIM33Q9UPN9 1127 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 YARS2Q9Y2Z4 477 aaKnown RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 GPR45Q9Y5Y3 372 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 SPTA1P02549 2419 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 CCDC88CQ9P219 2028 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 TLN1Q9Y490 2541 aaKnown RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 A0A087WV62 115 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 A0A0G2JND7 137 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 C2orf92A0A1B0GVN3 265 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 A0A1W2PRB8 838 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 OR5H15A6NDH6 313 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 E9PBE3 544 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 PLOD3O60568 738 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 ITGA10O75578 1167 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 PDGFAP04085 211 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 IFI6P09912 130 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 LAMP1P11279 417 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 PTGER1P34995 402 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 FRKP42685 505 aaPredicted RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 KIR3DL1P43629 444 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 SSR4P51571 173 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 MRPS35P82673 323 aaKnown RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 OC90Q02509 493 aaPredicted RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 MGAT2Q10469 447 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 KLRB1Q12918 225 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 TLR1Q15399 786 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 PDCD4Q53EL6 469 aaKnown RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 TRMT12Q53H54 448 aaKnown RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 ANXA8L1Q5VT79 327 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 TMEM198Q66K66 360 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 C9orf40Q8IXQ3 194 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 BEST3Q8N1M1 668 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 MIER2Q8N344 545 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 TMEM156Q8N614 296 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 AMER2Q8N7J2 671 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 OR52R1Q8NGF1 315 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 SLC22A8Q8TCC7 542 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 OR5P2Q8WZ92 322 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 KAT2AQ92830 837 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 CIDECQ96AQ7 238 aaPredicted RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 THOC1Q96FV9 657 aaKnown RBP12.31□□□□□ -0.44
MDC1-209ENST00000613547 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 WWTR1Q9GZV5 400 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.31□□□□□ -0.44
MDC1-209ENST00000613547 C3orf14Q9HBI5 128 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 NEUROD4Q9HD90 331 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 TAS2R9Q9NYW1 312 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 ZNF639Q9UID6 485 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 PCDHGB4Q9UN71 923 aa12.31□□□□□ -0.44
MDC1-209ENST00000613547 K7EM74 188 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 WWP2O00308 870 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 PLOD2O00469 737 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 ANKRD28O15084 1053 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 PRKNO60260 465 aaPredicted RBP12.3□□□□□ -0.44
MDC1-209ENST00000613547 SLC22A3O75751 556 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 OR2J2O76002 312 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 WDPCPO95876 746 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 S1PR1P21453 382 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 S100A3P33764 101 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 MC3RP41968 323 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 NME5P56597 212 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 DCAF7P61962 342 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 LRRC74AQ0VAA2 488 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 NFATC3Q12968 1075 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 EXOSC7Q15024 291 aaKnown RBP12.3□□□□□ -0.44
MDC1-209ENST00000613547 MLC1Q15049 377 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 EBPQ15125 230 aaKnown RBP12.3□□□□□ -0.44
MDC1-209ENST00000613547 PRSS53Q2L4Q9 553 aa12.3□□□□□ -0.44
MDC1-209ENST00000613547 MPEG1Q2M385 716 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms