RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 GTF2IRD2Q86UP8 949 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ABHD5Q8WTS1 349 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 NEDD4LQ96PU5 975 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 IL26Q9NPH9 171 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 HEBP1Q9NRV9 189 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 RXFP3Q9NSD7 469 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ETAA1Q9NY74 926 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 SLC33A1O00400 549 aaPredicted RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ARG2P78540 354 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 MLC1Q15049 377 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ATP6AP1Q15904 470 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 IER5LQ5T953 404 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 LRFN4Q6PJG9 635 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 PITX2Q99697 317 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 TAS2R10Q9NYW0 307 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 SCP2D1Q9UJQ7 156 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 KCNS2Q9ULS6 477 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 A0A0G2JPF8 293 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 A6NL46 340 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 OR52A4PA6NMU1 304 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 HNRNPCL3B7ZW38 293 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 SMAD6O43541 496 aaKnown RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 FAM189A1O60320 539 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 HNRNPCL4P0DMR1 293 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 KIR2DS3Q14952 304 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 CTC1Q2NKJ3 1217 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 COMMD6Q7Z4G1 85 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 IL17RCQ8NAC3 791 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 CLEC1AQ8NC01 280 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 THAP6Q8TBB0 222 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 FUBP1Q96AE4 644 aaKnown RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 DPH2Q9BQC3 489 aaPredicted RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 C12orf4Q9NQ89 552 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 NOP16Q9Y3C1 178 aaKnown RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 CRYBG1Q9Y4K1 1723 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ZNF12P17014 697 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ECHDC3Q96DC8 303 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 FUZQ9BT04 418 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 SLC6A15Q9H2J7 730 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 MKS1Q9NXB0 559 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ATXN7L1Q9ULK2 861 aaPredicted RBP19.22■□□□□ 0.67
CTDP1-208ENST00000613122 SRPK3Q9UPE1 567 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 CMAHPQ9Y471 501 aa19.22■□□□□ 0.67
CTDP1-208ENST00000613122 ZNF28P17035 718 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 PGGT1BP53609 377 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 HMBOX1Q6NT76 420 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 CCNL2Q96S94 520 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 AIFM2Q9BRQ8 373 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 PTRH2Q9Y3E5 179 aaKnown RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 ZSCAN5BA6NJL1 495 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 ZNF888P0CJ79 500 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 RIDAP52758 137 aaKnown RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 ADAM17P78536 824 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 DNASE1L3Q13609 305 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 IRF4Q15306 451 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 PARS2Q7L3T8 475 aaKnown RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 HSD11B1LQ7Z5J1 315 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 SLC5A8Q8N695 610 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 OR2L2Q8NH16 312 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 SPRYD4Q8WW59 207 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 CITED4Q96RK1 184 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 MCOLN1Q9GZU1 580 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 MTHFD2LQ9H903 347 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 OXSR1O95747 527 aaPredicted RBP19.21■□□□□ 0.67
CTDP1-208ENST00000613122 NOVP48745 357 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 CDK3Q00526 305 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 RDH12Q96NR8 316 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 OR10A4Q9H209 315 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 PCTPQ9UKL6 214 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 C13orf42A0A1B0GVH6 325 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 GRXCR2A6NFK2 248 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 ANXA3P12429 323 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 HSD17B12Q53GQ0 312 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 ALG10BQ5I7T1 473 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 UEVLDQ8IX04 471 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 LAS2Q8IYD9 372 aa19.21■□□□□ 0.67
CTDP1-208ENST00000613122 GGT3PA6NGU5 568 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 HOXB9P17482 250 aaPredicted RBP19.2■□□□□ 0.66
CTDP1-208ENST00000613122 CHRFAM7AQ494W8 412 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 TUBA3EQ6PEY2 450 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 RANBP10Q6VN20 620 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 DMRTB1Q96MA1 342 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 DRGXA6NNA5 263 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 CD63P08962 238 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 NDUFV2P19404 249 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 CERS1P27544 350 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 CD38P28907 300 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 SLC6A11P48066 632 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 MRPS21P82921 87 aaKnown RBP19.2■□□□□ 0.66
CTDP1-208ENST00000613122 EEF1A1P5Q5VTE0 462 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 PNCKQ6P2M8 343 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 LCTLQ6UWM7 567 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 EHD1Q9H4M9 534 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 ACAD8Q9UKU7 415 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 SH2B3Q9UQQ2 575 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 EN2P19622 333 aaPredicted RBP19.2■□□□□ 0.66
CTDP1-208ENST00000613122 SOX9P48436 509 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 ANKDD1AQ495B1 522 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 DTD2Q96FN9 168 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms