RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 HLA-DQA1Q5Y7H0 255 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 ALKBH2Q6NS38 261 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 AAGABQ6PD74 315 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 MEX3DQ86XN8 651 aaKnown RBP9.28□□□□□ -0.92
SSX3-204ENST00000612497 UBL4BQ8N7F7 174 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 RAB3IL1Q8TBN0 382 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 ZNF669Q96BR6 464 aaPredicted RBP9.28□□□□□ -0.92
SSX3-204ENST00000612497 NTMT1Q9BV86 223 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 ACTR8Q9H981 624 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 CHODLQ9H9P2 273 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 PRDM7Q9NQW5 492 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 SNX15Q9NRS6 342 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 TAS2R13Q9NYV9 303 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 PTBP2Q9UKA9 531 aaKnown RBP9.28□□□□□ -0.92
SSX3-204ENST00000612497 PROCRQ9UNN8 238 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 DTX4Q9Y2E6 619 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 A0A096LNT2 108 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 A0A1W2PP18 115 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 SYCE3A1L190 88 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 OR6C76A6NM76 312 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 CBR3O75828 277 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 MBD3O95983 291 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 DANCRP0C864 163 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 C1GALT1C1LP0DN25 315 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 CD8BP10966 210 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 ALOX15P16050 662 aaPredicted RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 ZNF708P17019 499 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 KRT15P19012 456 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 GSTM2P28161 218 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 KCNC1P48547 511 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 GFRA1P56159 465 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 CLDN18P56856 261 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 NRG3P56975 720 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 SLC37A1P57057 533 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 IGLV3-21P80748 117 aaPredicted RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 TIAL1Q01085 375 aaKnown RBP eCLIP9.27□□□□□ -0.93
SSX3-204ENST00000612497 LOXL1Q08397 574 aaPredicted RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 SQLEQ14534 574 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 ADPRMQ3LIE5 342 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 PDLIM3Q53GG5 364 aaPredicted RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 FAM120AOSQ5T036 256 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 ADAM5Q6NVV9 412 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 PEX26Q7Z412 305 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 PRR22Q8IZ63 422 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 KRT78Q8N1N4 520 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 PPM1NQ8N819 430 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 LILRB1Q8NHL6 650 aaPredicted RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 SGMS2Q8NHU3 365 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 C1orf54Q8WWF1 131 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 SFXN2Q96NB2 322 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 KCNC2Q96PR1 638 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 F2RL3Q96RI0 385 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 PHACTR1Q9C0D0 580 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 OR2B2Q9GZK3 357 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 C12orf65Q9H3J6 166 aaKnown RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 PRM3Q9NNZ6 103 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 TAS2R10Q9NYW0 307 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 FBXO5Q9UKT4 447 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 PACSIN2Q9UNF0 486 aaPredicted RBP9.27□□□□□ -0.93
SSX3-204ENST00000612497 RNF115Q9Y4L5 304 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 CADP27708 2225 aa9.27□□□□□ -0.93
SSX3-204ENST00000612497 UQCRHLA0A096LP55 91 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 TCF21O43680 179 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 OR10H2O60403 315 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 DLX3O60479 287 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 TBX6O95947 436 aaPredicted RBP9.26□□□□□ -0.93
SSX3-204ENST00000612497 THBS1P07996 1170 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 GNAZP19086 355 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 HNF1AP20823 631 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 TCEA1P23193 301 aaKnown RBP9.26□□□□□ -0.93
SSX3-204ENST00000612497 IGFBP5P24593 272 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 NUDT6P53370 316 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 IL2P60568 153 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 RPS13P62277 151 aaKnown RBP9.26□□□□□ -0.93
SSX3-204ENST00000612497 BIKQ13323 160 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 FGFBP1Q14512 234 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 ADNP2Q6IQ32 1131 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 SLC30A6Q6NXT4 461 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 CLEC2AQ6UVW9 174 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 ZNF793Q6ZN11 406 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 SLCO4C1Q6ZQN7 724 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 VN1R5Q7Z5H4 357 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 UBQLNLQ8IYU4 475 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 ACOT4Q8N9L9 421 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 OR10H5Q8NGA6 315 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 FIG4Q92562 907 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 NEUROG1Q92886 237 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 RIT1Q92963 219 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 TP53INP1Q96A56 240 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 RHBDF1Q96CC6 855 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 ZMYND19Q96E35 227 aaPredicted RBP9.26□□□□□ -0.93
SSX3-204ENST00000612497 C1orf159Q96HA4 380 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 FRMD8P1Q9BZ68 369 aaPredicted RBP9.26□□□□□ -0.93
SSX3-204ENST00000612497 ROGDIQ9GZN7 287 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 ALG2Q9H553 416 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 C20orf96Q9NUD7 363 aaPredicted RBP9.26□□□□□ -0.93
SSX3-204ENST00000612497 KCNS2Q9ULS6 477 aa9.26□□□□□ -0.93
SSX3-204ENST00000612497 EXO1Q9UQ84 846 aaKnown RBP9.26□□□□□ -0.93
SSX3-204ENST00000612497 GRID2IPA4D2P6 1211 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms