RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RHCGQ9UBD6 479 aa13.9□□□□□ -0.18
CDH1-213ENST00000612417 TAC3Q9UHF0 121 aa13.9□□□□□ -0.18
CDH1-213ENST00000612417 MGAT4BQ9UQ53 548 aa13.9□□□□□ -0.18
CDH1-213ENST00000612417 GPSM3Q9Y4H4 160 aa13.9□□□□□ -0.18
CDH1-213ENST00000612417 LOC100506127A0A0U1RQW1 187 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 LATO43561 262 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 SEMA7AO75326 666 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 ADRA2AP08913 450 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 SLC35G4P0C7Q5 338 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 ELAVL4P26378 380 aaKnown RBP13.89□□□□□ -0.19
CDH1-213ENST00000612417 CLCNKAP51800 687 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 RPS26P62854 115 aaKnown RBP13.89□□□□□ -0.19
CDH1-213ENST00000612417 MLC1Q15049 377 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 MAPK11Q15759 364 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 RPS26P11Q5JNZ5 115 aaPredicted RBP13.89□□□□□ -0.19
CDH1-213ENST00000612417 SLX4IPQ5VYV7 408 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 TCTN3Q6NUS6 607 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 TNFAIP8L2Q6P589 184 aaPredicted RBP13.89□□□□□ -0.19
CDH1-213ENST00000612417 SMPDL3AQ92484 453 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 MGLLQ99685 303 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 ACAT2Q9BWD1 397 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 RSPO3Q9BXY4 272 aaPredicted RBP13.89□□□□□ -0.19
CDH1-213ENST00000612417 UCK2Q9BZX2 261 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 LHX9Q9NQ69 397 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 INIPQ9NRY2 104 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 ACSS1Q9NUB1 689 aaPredicted RBP13.89□□□□□ -0.19
CDH1-213ENST00000612417 ADAM29Q9UKF5 820 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 PEX16Q9Y5Y5 336 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 POM121BA6NF01 834 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 CCRL2O00421 344 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 HMGN4O00479 90 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 FAAHO00519 579 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 SCAMP1O15126 338 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 B4GALT2O60909 372 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 CEACAM5P06731 702 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 S100A5P33763 92 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 CCR8P51685 355 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 CRISP3P54108 245 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 MEDAGQ5VYS4 303 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 C6orf120Q7Z4R8 191 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 NLGN4XQ8N0W4 816 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 ZBED6CLQ96FA7 236 aaPredicted RBP13.89□□□□□ -0.19
CDH1-213ENST00000612417 ZNF354BQ96LW1 612 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 OR5M11Q96RB7 305 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 F2RL3Q96RI0 385 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 CHCHD6Q9BRQ6 235 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 FUZQ9BT04 418 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 RACGAP1Q9H0H5 632 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 PRDM8Q9NQV8 689 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 KCNK6Q9Y257 313 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 CFL2Q9Y281 166 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 CA5BQ9Y2D0 317 aa13.89□□□□□ -0.19
CDH1-213ENST00000612417 MN1Q10571 1320 aaPredicted RBP13.88□□□□□ -0.19
CDH1-213ENST00000612417 FAM227AF5H4B4 570 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 TLR4O00206 839 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 RTCAO00442 366 aaKnown RBP13.88□□□□□ -0.19
CDH1-213ENST00000612417 KCNJ5P48544 419 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 CYP4F2P78329 520 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 RHAGQ02094 409 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 TFF2Q03403 129 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDH1-213ENST00000612417 CD300CQ08708 224 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 SEC23BQ15437 767 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 LEXMQ3ZCV2 418 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 SOWAHCQ53LP3 525 aaPredicted RBP13.88□□□□□ -0.19
CDH1-213ENST00000612417 STEAP3Q658P3 488 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 C12orf73Q69YU5 71 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 FAM180BQ6P0A1 224 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 NUDT13Q86X67 352 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 C2orf73Q8N5S3 287 aaPredicted RBP13.88□□□□□ -0.19
CDH1-213ENST00000612417 Q96MT0 163 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 TEFMQ96QE5 360 aaKnown RBP13.88□□□□□ -0.19
CDH1-213ENST00000612417 ZNF607Q96SK3 696 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 ABCG4Q9H172 646 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 RNF167Q9H6Y7 350 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 LMAN1LQ9HAT1 526 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 ABCB10Q9NRK6 738 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 CUEDC1Q9NWM3 386 aaPredicted RBP13.88□□□□□ -0.19
CDH1-213ENST00000612417 TAS2R16Q9NYV7 291 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 TAS2R7Q9NYW3 318 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 ANKMY1Q9P2S6 941 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 MKLN1Q9UL63 735 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 ACSL5Q9ULC5 683 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 SLC17A4Q9Y2C5 497 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 PLEKHM1Q9Y4G2 1056 aa13.88□□□□□ -0.19
CDH1-213ENST00000612417 SLITRK5O94991 958 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 SNX4O95219 450 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 PTTG1O95997 202 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 H1F0P07305 194 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 HSMCR30P0CW71 290 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 IL9P15248 144 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 ENDOUP21128 410 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 SMIM11AP58511 58 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 TRA2BP62995 288 aaKnown RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 MLLT1Q03111 559 aaPredicted RBP13.87□□□□□ -0.19
CDH1-213ENST00000612417 MED22Q15528 200 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 DCST1Q5T197 706 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 ASB12Q8WXK4 309 aa13.87□□□□□ -0.19
CDH1-213ENST00000612417 TRNT1Q96Q11 434 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms