RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 KLHL20Q9Y2M5 609 aa16.27■□□□□ 0.2
NEK3-206ENST00000611833 CAB39Q9Y376 341 aaPredicted RBP16.27■□□□□ 0.2
NEK3-206ENST00000611833 A0A1W2PRQ8 180 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 PDZK1P1A8MUH7 402 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 PTTG1O95997 202 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 PAK4O96013 591 aaPredicted RBP16.27■□□□□ 0.19
NEK3-206ENST00000611833 PSMA1P25786 263 aaKnown RBP16.27■□□□□ 0.19
NEK3-206ENST00000611833 PTGER1P34995 402 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 RUNX3Q13761 415 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 FGL2Q14314 439 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 SLC9A5Q14940 896 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 IRF4Q15306 451 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 CST6Q15828 149 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 MFSD4BQ5TF39 518 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 KIAA1161Q6NSJ0 714 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 ZNF793Q6ZN11 406 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 COMTD1Q86VU5 262 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 FAM20CQ8IXL6 584 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 TP53I13Q8NBR0 393 aaPredicted RBP16.27■□□□□ 0.19
NEK3-206ENST00000611833 TTLQ8NG68 377 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 OR2A1Q8NGT9 310 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 KLK6Q92876 244 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 CAMK1GQ96NX5 476 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 MACROD1Q9BQ69 325 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 ASPNQ9BXN1 380 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 KLHL31Q9H511 634 aa16.27■□□□□ 0.19
NEK3-206ENST00000611833 CRNNQ9UBG3 495 aaPredicted RBP16.27■□□□□ 0.19
NEK3-206ENST00000611833 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.27■□□□□ 0.19
NEK3-206ENST00000611833 TRANK1O15050 2925 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 CTDSP2O14595 271 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 TLX2O43763 284 aaPredicted RBP16.26■□□□□ 0.19
NEK3-206ENST00000611833 SLITRK5O94991 958 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 BUD31P41223 144 aaPredicted RBP16.26■□□□□ 0.19
NEK3-206ENST00000611833 RAB28P51157 221 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 GPR19Q15760 415 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 BBS10Q8TAM1 723 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 FUZQ9BT04 418 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 EHD3Q9NZN3 535 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 KLHL3Q9UH77 587 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 KCNK6Q9Y257 313 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 LSM2Q9Y333 95 aaKnown RBP16.26■□□□□ 0.19
NEK3-206ENST00000611833 STON1Q9Y6Q2 735 aa16.26■□□□□ 0.19
NEK3-206ENST00000611833 LOC110117498-PIK3R3F6TDL0 507 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 MYL12BO14950 172 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 ALPPL2P10696 532 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 TRIM23P36406 574 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 ANXA11P50995 505 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 DEFA1P59665 94 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 DEFA3P59666 94 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 COX10Q12887 443 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 SLAMF1Q13291 335 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 GPM6BQ13491 265 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 KRR1Q13601 381 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 C1DQ13901 141 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 OCLNQ16625 522 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 TMEM35AQ53FP2 167 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 C2orf27AQ580R0 203 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 IQCHQ86VS3 1027 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 OR4K5Q8NGD3 323 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 PIK3R3Q92569 461 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 POLR2J2Q9GZM3 115 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 RACGAP1Q9H0H5 632 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 MRPS30Q9NP92 439 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 CTPS2Q9NRF8 586 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 ZFR2Q9UPR6 939 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 A0A1W2PP55 124 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 MAN2B1O00754 1011 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 SNPHO15079 494 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 ERI3O43414 337 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 CA3P07451 260 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 MMP11P24347 488 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 BCL6P41182 706 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 ETV6P41212 452 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 TPTEP56180 551 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 ALDH6A1Q02252 535 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 LASP1Q14847 261 aaKnown RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 CARTPTQ16568 116 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 BHLHB9Q6PI77 547 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 NCCRP1Q6ZVX7 275 aaPredicted RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 ZER1Q7Z7L7 766 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 CCDC190Q86UF4 302 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 HDDC3Q8N4P3 179 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 NANOGP1Q8N7R0 232 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 OR6T1Q8NGN1 323 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 OR9Q1Q8NGQ5 310 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 OR8K5Q8NH50 307 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 SLC6A18Q96N87 628 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 RSPH9Q9H1X1 276 aaPredicted RBP16.25■□□□□ 0.19
NEK3-206ENST00000611833 SEC14L4Q9UDX3 406 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 MOSPD1Q9UJG1 213 aa16.25■□□□□ 0.19
NEK3-206ENST00000611833 GPR89AB7ZAQ6 455 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 RGS5O15539 181 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 PRKYO43930 277 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 KCNK2O95069 426 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 TP53P04637 393 aaPredicted RBP16.24■□□□□ 0.19
NEK3-206ENST00000611833 GPR89BP0CG08 455 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 SPNP16150 400 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 PCYT1AP49585 367 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 DMPKQ09013 629 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms