RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TREX2Q9BQ50 279 aaPredicted RBP8.24□□□□□ -1.09
LIG4-204ENST00000611712 BTBD1Q9H0C5 482 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 TMEM38AQ9H6F2 299 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 SIRT5Q9NXA8 310 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 IL20RAQ9UHF4 553 aa8.24□□□□□ -1.09
LIG4-204ENST00000611712 MBD1Q9UIS9 605 aaPredicted RBP8.24□□□□□ -1.09
LIG4-204ENST00000611712 IGLV3-16A0A075B6K0 115 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 KCNE1BA0A087WTH5 132 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SLC35F4A4IF30 521 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ZNF860A6NHJ4 632 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 OR52A4PA6NMU1 304 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ARHGAP33O14559 1287 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 EMC8O43402 210 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 DYRK3O43781 588 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 KAT7O95251 611 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 CXCL10P02778 98 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 HMGN2P05204 90 aaKnown RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 MTNR1AP48039 350 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 WNT3P56703 355 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SKP1P63208 163 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ILF3Q12906 894 aaKnown RBP eCLIP8.23□□□□□ -1.09
LIG4-204ENST00000611712 DSG2Q14126 1118 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SUZ12Q15022 739 aaKnown RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 OXA1LQ15070 435 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 STEAP3Q658P3 488 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ADAMTS19Q8TE59 1207 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 RNF167Q9H6Y7 350 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 HCN2Q9UL51 889 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 EXOSC1Q9Y3B2 195 aaKnown RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 A0A0G2JMZ2 1700 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 MGAMO43451 1857 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 C1orf226A1L170 272 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 STK25O00506 426 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 DHFRP00374 187 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 CCR2P41597 374 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ZNF91Q05481 1191 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 MAP4K2Q12851 820 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 TMEM35AQ53FP2 167 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ZNF776Q68DI1 518 aaPredicted RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 TMEM53Q6P2H8 277 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 FAHD1Q6P587 224 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 PODNL1Q6PEZ8 512 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ASB18Q6ZVZ8 466 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 CCDC80Q76M96 950 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 KCT2Q8NC54 265 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 HERVK_113Q902F9 699 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SMARCD2Q92925 531 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SLC22A18Q96BI1 424 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SECISBP2Q96T21 854 aaKnown RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 HDHD5Q9BXW7 423 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 NKIRAS2Q9NYR9 191 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 CNIH4Q9P003 139 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 PCDH10Q9P2E7 1040 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 WDR90Q96KV7 1748 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 TRBV5-3A0A0A0MS03 114 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 C17orf113A0A1B0GUU1 675 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 AQP9O43315 295 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ORC5O43913 435 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SULT1C4O75897 302 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 NUDT14O95848 222 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 TNFSF8P32971 234 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 SLC19A1P41440 591 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 GPR4P46093 362 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 RNF144AP50876 292 aaPredicted RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 E2F2Q14209 437 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 WSCD2Q2TBF2 565 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 FAM214AQ32MH5 1076 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 TBRG1Q3YBR2 411 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 DEFB134Q4QY38 66 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 UBE2UQ5VVX9 321 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 FAM83FQ8NEG4 500 aaPredicted RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 OR52P1PQ8NH57 321 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 GRHL3Q8TE85 626 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 YIPF6Q96EC8 236 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 FRMD6Q96NE9 622 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 CCDC32Q9BV29 185 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 IL23AQ9NPF7 189 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 ACER3Q9NUN7 267 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 NDOR1Q9UHB4 597 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 TDRD15B5MCY1 1934 aaKnown RBP8.23□□□□□ -1.09
LIG4-204ENST00000611712 SCN10AQ9Y5Y9 1956 aa8.23□□□□□ -1.09
LIG4-204ENST00000611712 A0A1W2PQL4 384 aaPredicted RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 METTL15A6NJ78 407 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 OLFM2O95897 454 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 AGR2O95994 175 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 HTR1AP08908 422 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 IFI30P13284 250 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 VEGFBP49765 207 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 RAB14P61106 215 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 HTRA3P83110 453 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 CDK3Q00526 305 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 LGALS3BPQ08380 585 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 ARHGAP19Q14CB8 494 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 PRPF38BQ5VTL8 546 aaKnown RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 GDPGP1Q6ZNW5 385 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 RNF165Q6ZSG1 346 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 OR4N5Q8IXE1 308 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 CADM3Q8N126 398 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms