RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	KCNK5	O95279	499 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	ADH7	P40394	386 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	PON3	Q15166	354 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	PLAG1	Q6DJT9	500 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	CBLL1	Q75N03	491 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	BTLA	Q7Z6A9	289 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF761	Q86XN6	746 aa	Predicted RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	OR8S1	Q8NH09	359 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	BBS10	Q8TAM1	723 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF689	Q96CS4	500 aa	Predicted RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	SLC46A2	Q9BY10	475 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	GPN1	Q9HCN4	374 aa	Predicted RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	CLEC4E	Q9ULY5	219 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	ATG2B	Q96BY7	2078 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	TRIM3	O75382	744 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	CSNK1D	P48730	415 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	FAAH2	Q6GMR7	532 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	SERPINA11	Q86U17	422 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	CPO	Q8IVL8	374 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ELMOD2	Q8IZ81	293 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	OR5M3	Q8NGP4	307 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	MUL1	Q969V5	352 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	KXD1	Q9BQD3	176 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	SLC25A37	Q9NYZ2	338 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	NPIPA5	A0A0B4J1W7	369 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	NPIPA7	E9PJI5	369 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	AQP9	O43315	295 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	GPR37L1	O60883	481 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	CDK1	P06493	297 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	NPIPA8	P0DM63	369 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF3	P17036	446 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	LRRC37A5P	Q49AS3	106 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	PNCK	Q6P2M8	343 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	TMPRSS9	Q7Z410	1059 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	TMEM179B	Q7Z7N9	219 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	PROKR2	Q8NFJ6	384 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	CHPT1	Q8WUD6	406 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	HMGB4	Q8WW32	186 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	COQ8B	Q96D53	544 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	KLF16	Q9BXK1	252 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	DPAGT1	Q9H3H5	408 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	SIAE	Q9HAT2	523 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	RLIM	Q9NVW2	624 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	GYPB	P06028	91 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	OSM	P13725	252 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	IL1RN	P18510	177 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	CLK3	P49761	638 aa	Known RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	KEAP1	Q14145	624 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	AMZ1	Q400G9	498 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	SCGB2B2	Q4G0G5	96 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	BCL2L15	Q5TBC7	163 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF783	Q6ZMS7	281 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	CADM3	Q8N126	398 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	OR52P1P	Q8NH57	321 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	MSANTD3	Q96H12	275 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF486	Q96H40	463 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ADAD1	Q96M93	576 aa	Known RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	BCL2L14	Q9BZR8	327 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	CPNE5	Q9HCH3	593 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	PFDN2	Q9UHV9	154 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	STUB1	Q9UNE7	303 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	HSPE1-MOB4	S4R3N1	261 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ZSCAN5B	A6NJL1	495 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	C12orf71	A8MTZ7	269 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	MEN1	O00255	615 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	GNS	P15586	552 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	FAU	P35544	74 aa	Known RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	EIF1AX	P47813	144 aa	Known RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ISL1	P61371	349 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	C1orf61	Q13536	156 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	KCNC3	Q14003	757 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	VEZF1	Q14119	521 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	FGFBP1	Q14512	234 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	BTN2A1	Q7KYR7	527 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	PTRH1	Q86Y79	214 aa	Known RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	SLC30A8	Q8IWU4	369 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	BEST4	Q8NFU0	473 aa		13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ERMAP	Q96PL5	475 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	DPCD	Q9BVM2	203 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF717	Q9BY31	904 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.17	□□□□□ -0.3
MUC1-223	ENST00000611571	B4GALT3	O60512	393 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	RCBTB2	O95199	551 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	GAST	P01350	101 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	HMGN2	P05204	90 aa	Known RBP	13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	GABRA3	P34903	492 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	DEFA5	Q01523	94 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	ERN2	Q76MJ5	926 aa	Known RBP	13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	GPR135	Q8IZ08	494 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	OR2T33	Q8NG76	320 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	SRA1	Q9HD15	236 aa	Known RBP	13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	PCDHGA4	Q9Y5G9	962 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	MCM3AP	O60318	1980 aa		13.16	□□□□□ -0.3
MUC1-223	ENST00000611571	LOC102723532	A0A0G2JNH3	316 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms