RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CCDC192P0DO97 292 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 ALPPL2P10696 532 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 DESP17661 470 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 HOXD10P28358 340 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 SPRP35270 261 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 GSK3BP49841 420 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 CCL11P51671 97 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 RPS4XP62701 263 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 IRX3P78415 501 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 COX10Q12887 443 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 KLF5Q13887 457 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 EMC2Q15006 297 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 LPAL2Q16609 132 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 HERC4Q5GLZ8 1057 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 STEAP1BQ6NZ63 245 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 CNSTQ6PJW8 725 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 BNIPLQ7Z465 357 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNF619Q8N2I2 560 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 C17orf47Q8NEP4 570 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 OR4F5Q8NH21 305 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 CAPNS2Q96L46 248 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 TMEM237Q96Q45 408 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 PSMB7Q99436 277 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 RBM24Q9BX46 236 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 TRIM6Q9C030 488 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 TNMDQ9H2S6 317 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 DCTPP1Q9H773 170 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 HPS4Q9NQG7 708 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 HOMER3Q9NSC5 361 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 DNPEPQ9ULA0 475 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 SPATA2Q9UM82 520 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 TEX48A0A1B0GUV7 120 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 RPL37AP8A6NKH3 93 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 RNF212BA8MTL3 300 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 SHISA9B4DS77 424 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 PES1O00541 588 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 CRLF1O75462 422 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 B3GALNT1O75752 331 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 CXCL10P02778 98 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 PGK2P07205 417 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 FOSL2P15408 326 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 GNSP15586 552 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 IL4RP24394 825 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 CALML3P27482 149 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 SHC1P29353 583 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 SFNP31947 248 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 NDST1P52848 882 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 NLRP11P59045 1033 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 GSTO1P78417 241 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 PDK1Q15118 436 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 TMEM44Q2T9K0 475 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 CCDC40Q4G0X9 1142 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 UNC50Q53HI1 259 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 C9orf66Q5T8R8 295 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 RHBDD2Q6NTF9 364 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 EMBQ6PCB8 327 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 WDR88Q6ZMY6 472 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 C1orf186Q6ZWK4 172 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 TMUB2Q71RG4 321 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 TIPARPQ7Z3E1 657 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 GPR142Q7Z601 462 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 TAF8Q7Z7C8 310 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC25A42Q86VD7 318 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC47A2Q86VL8 602 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC22A16Q86VW1 577 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 CCDC71Q8IV32 467 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 IQCF2Q8IXL9 164 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 P3H4Q92791 437 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 COQ7Q99807 217 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 ADNPQ9H2P0 1102 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 GNB4Q9HAV0 340 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 TAS2R16Q9NYV7 291 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 RABL2AQ9UBK7 228 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 CCPG1Q9ULG6 757 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC6A5Q9Y345 797 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 MTF2Q9Y483 593 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 STYXL1Q9Y6J8 313 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 AFF2P51816 1311 aa3.44□□□□□ -1.86
SMCHD1-213ENST00000609587 COL2A1P02458 1487 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 NPC1L1Q9UHC9 1359 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 IGHV3-16A0A0C4DH30 117 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 RNF103-CHMP3A0A140T963 221 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 A0A1B0GTH9 108 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 TMEM89A2RUT3 159 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 CFAP73A6NFT4 308 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ACOD1A6NK06 481 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ARPC1BO15143 372 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 SEC22BO75396 215 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 PDGFBP01127 241 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 HCKP08631 526 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 HOXD4P09016 255 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 CAPN2P17655 700 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 ACP1P24666 158 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 PRELPP51888 382 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 STARD6P59095 220 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 HMGN5P82970 282 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 IL1RL1Q01638 556 aa3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 BTG3Q14201 252 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-213ENST00000609587 CLPPQ16740 277 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms